Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1017 |
Symbol | |
ID | 4644238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1066865 |
End bp | 1068202 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639804518 |
Product | glucarate dehydratase |
Protein accession | YP_951861 |
Protein GI | 120402032 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0552689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.150619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC CTGTCATCAC CGACGTCACC GTTGTACCGA TCGCCGGTCA CGACAGCATG CTGTTGAACC TCTCCGGCGC GCACGGCCCG TTCTTCACCC GCAACCTCGT CATCGTCGAG GACTCCGAAG GCAACACCGG AGTCGGCGAG GTGCCGGGCG GTGAGCCGAT CCGCCGGACG CTGCAGGATG CGCGAGGGAT CGTCACCGGC CGCAGCATCG GCGACTACCA CGCCGTCCTC AACGAGATGC GCCGCACCTT CGCCGACCGC GACGCCGGCG GTCGCGGCGC CCAGACCTTC GACCTGCGGG TGACCGTACA TGCAGTCACC GCAATCGAAT CCGCGCTGAT GGACCTGCTC GGCCAGCACC TGGAGGTGCC GGTGGCCGCG CTGCTCGGCG ACGGGCAGCA GCGGTCGCGG GTGCAGGCGC TGGGTTACCT GTTCTTCGTC GGGGACCGCA CCCGGACCGA CCTCGCGTAC CGCTCCCCGT CCGACGAGGA GCCTGGGGCC GACGACTGGT TCACCGTCCG CCACGAGGAG GCGATGACCC CCGACGCGGT GGTCCGACTC GCCGAGGCCG CCCGCGCCCG CTACGGGTTC GCCGACTTCA AGCTCAAGGG TGGTGTGCTG CCCGCGGCCG ACGAGGCCAA AGCGGTCATC GCGCTGGCCG AGCGGTTCCC CGATTCTCGA ATCACGCTGG ACCCCAACGG AGGCTGGCTG CTGGCCGACG CGATCAGGAC ATGCCGCGAG CTCAAAGACG TGCTGGCCTA CGCCGAGGAC CCGGTCGGAC CGGAAGACGG GTTCTCCGGA CGCGAGGTGA TGGCAGAGTT CAAGCGCGCC ACCGGCCTGC CGACCGCGAC CAACATGATC GCCACCGACT GGCGAGAGAT GGGTCATGCC ATCCGATCCG GCGCCGTGGA CATCCCGCTG GCCGACCCGC ACTTCTGGAC GATGACCGGC TCCGTGCGCG TCGCGCAGCT CTGCGATGCC TGGGGACTGA CATGGGGTTC GCACTCCAAC AACCACTTCG ACGTTTCGCT GGCGATGTTC ACCCATGTCG CCGCCGCCGC GCCCGGTGAC ATCACCGCGA TCGACACACA CTGGATCTGG CAGGACGGCC AGGCGATCAC CACGAATCCG TACCCGATCG TCGACGGCTA CCTGAGCGTG CCGGACGCCC CCGGCCTCGG CGTCACGCTC GATGAGCCCG CGGTGCAGGC CGCGCACGCG CTGTACCAAC GGGAGGGGCT CGGCGGCCGT GACGACGCCG TCGCGATGCA GTACCTCATC CCGGGCTGGA CGTTCGACGG CAAGCGACCC GCGCTGGACC GGGGATGA
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Protein sequence | MRTPVITDVT VVPIAGHDSM LLNLSGAHGP FFTRNLVIVE DSEGNTGVGE VPGGEPIRRT LQDARGIVTG RSIGDYHAVL NEMRRTFADR DAGGRGAQTF DLRVTVHAVT AIESALMDLL GQHLEVPVAA LLGDGQQRSR VQALGYLFFV GDRTRTDLAY RSPSDEEPGA DDWFTVRHEE AMTPDAVVRL AEAARARYGF ADFKLKGGVL PAADEAKAVI ALAERFPDSR ITLDPNGGWL LADAIRTCRE LKDVLAYAED PVGPEDGFSG REVMAEFKRA TGLPTATNMI ATDWREMGHA IRSGAVDIPL ADPHFWTMTG SVRVAQLCDA WGLTWGSHSN NHFDVSLAMF THVAAAAPGD ITAIDTHWIW QDGQAITTNP YPIVDGYLSV PDAPGLGVTL DEPAVQAAHA LYQREGLGGR DDAVAMQYLI PGWTFDGKRP ALDRG
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