| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1012 |
|---|
| Symbol | |
|---|
| ID | 4644233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1061820 |
|---|
| End bp | 1062557 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639804513 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_951856 |
|---|
| Protein GI | 120402027 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.131331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG TGCTCATCAC AGGATGTTCG TCCGGCTACG GCCTCGCGAC AGCTCACCGT
TTCCTCGACG AAGGCTGGAA CGTCGTCGCC ACCATGCGAA CTCCCCGCCA GGATGTACTG
CCCCCCTCGG ACCGGCTGCG GGTGATCGCG CTCGACGTGA CCCGGCCTGA CAGCATCGCG
GCCGCGGTGG CGGCCGCCGG GCCGATCGAT GTGCTCGTCA ACAACGCCGG CATCGGCGCG
GTGGGTGCCT TCGAGGCGAC GCCGATGCAG ACCGTGCGAG AGCTGTTCGA CACCAACACC
TTCGGGGTGA TGGCGATGAC GCAGGCCGTG GTGCCGCAGA TGCGGGCGCG GCGCTCGGGC
GTCGTCGTCA ACGTCACGTC CAGCGTCACC CTGGCGGCGA TGCCGCTGGC GGCCGCCTAC
ACGGCCAGCA AGGCCGCGAT CGAAGGCTTC ACCGGTTCGC TGGCGTTGGA GCTCGGCTTC
TTCGGGGTGC GGGCAAAGCT CGTGGAGCCC GGCTACGGTC CGGGGACGCA GTTCGCCAGC
AACGGTTCTC ATCGGATGGC CGACCTGATC CCCGACGAGT ACCAGGATTT CGCCGCGCCG
ATCATGGAGT CGTTCGGATC ACCCGCTGCG GTGACCACCC CGGACGATGT CGCCGAGGTC
GTCTATCTGG CGGCGACGGA CGCCTCCGAC CGGCTCCGGT ATGCCGCCGG GGCCGACGCT
GTCGCCCTGG CCCAGTAG
|
|---|
| Protein sequence | MTTVLITGCS SGYGLATAHR FLDEGWNVVA TMRTPRQDVL PPSDRLRVIA LDVTRPDSIA
AAVAAAGPID VLVNNAGIGA VGAFEATPMQ TVRELFDTNT FGVMAMTQAV VPQMRARRSG
VVVNVTSSVT LAAMPLAAAY TASKAAIEGF TGSLALELGF FGVRAKLVEP GYGPGTQFAS
NGSHRMADLI PDEYQDFAAP IMESFGSPAA VTTPDDVAEV VYLAATDASD RLRYAAGADA
VALAQ
|
|---|
| |