Gene Mvan_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1008 
Symbol 
ID4645793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1054670 
End bp1055521 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID639804509 
Productacyl-CoA thioesterase 
Protein accessionYP_951852 
Protein GI120402023 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.473506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.312171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCAGC CGCGTGATCG ACGCCCCGTC CGGCCGCGCT GCGCATTCAC CTGTCACCGA 
TGGAGGGCCA TGCCGAGCTG GATCGCGGAT CTCGTAAGCC TCGACGGTGA TGGAGAGACC
TTTTGTAGCA CAGCGTCTTT CGGTGCCGGG AACCGTCTCT TCGGCGGGTT GATCGCCGCG
CAGGCCCTGG CCGCTGCCGG GGCGACCGTG GAATCCGCGA GGTTGCCGCA GTCGCTGCAC
GCGTACTTCA TCAAGGGCGG CCGCGTCGGG GTCGACGTGG AGTACGTCGT CGAGCGCACC
CGTGACGGTA AGTCGTTCAA CACGCGACGG GTGACGGCGA GCCAGGACGG CGTCGCCATC
TTCGAGATGC TGGTCTCGTT CCATCGATCC GAGCCGACCG CCGACTGGCA GCGGAGCCGG
CAGCCGACCA TCGCGCGGTC AGCGGTCACC AAGGCGACCC GGCTACCGGA GCGGTGGGCC
GATCATTTCG AGGTGCTCAC CGCCCGCGAT GGCATGGACG ACTGGCCGGT CCAGCCGATG
TGGTTCCGCA GCCGGCAGCC GGTGGAGGAC GATCCGCTGT TGCGGGCGTG CGCGCTGACC
TTGATCTCCG ACGTGGGCCT GGTGGCGGTG GCCCGCCCTC CGGGTGAGGC GCAACTGCCG
GGCCCCGGCG GGGCCGCCAG CCTCGACCAC GCGGTGTGGC TACACCGCCC CTTCGACCCG
CACCAGTGGC ATCTCTACGA CGCCGAAGCG GTCAGCCACA ACGACGCCCG TGGCCTCGCC
CGAGGATCGA TCGTCGACGA GCACGGGACG CTGGTGGCCA GCGTCGCGCA GGAGTCGTTG
TGGCGGATCT GA
 
Protein sequence
MCQPRDRRPV RPRCAFTCHR WRAMPSWIAD LVSLDGDGET FCSTASFGAG NRLFGGLIAA 
QALAAAGATV ESARLPQSLH AYFIKGGRVG VDVEYVVERT RDGKSFNTRR VTASQDGVAI
FEMLVSFHRS EPTADWQRSR QPTIARSAVT KATRLPERWA DHFEVLTARD GMDDWPVQPM
WFRSRQPVED DPLLRACALT LISDVGLVAV ARPPGEAQLP GPGGAASLDH AVWLHRPFDP
HQWHLYDAEA VSHNDARGLA RGSIVDEHGT LVASVAQESL WRI