| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0959 |
|---|
| Symbol | |
|---|
| ID | 4645866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 989095 |
|---|
| End bp | 990684 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639804459 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_951803 |
|---|
| Protein GI | 120401974 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAATT CCCTTGAGAT GGACGGGCGC GGCCCCACCG ACAGGCAATT GCTCGCGTGC
GGTGTCGCGC TGTTGGTGAT CGCATTGGTC GTCTCCGGCG CGCTGCTGGT CAAGTCGACC
GGCCGGATGG ACGCGCATGT GCGCGTCGTC GCCGCGCTGG TCAATGTCGG CGACGGGCTG
CCGCAGCGGT CCGACGTCAA GTACCACGGG GTGCTGGTCG GGGCCGTCGA CGACGTGACC
CCGGCGCAAT ACGGCGACCC GAACTTCGTG CACATCGACC TCAAACCCGA GTACGCCGCG
TCGATTCCGG CGGGTGTCAC CGCGCGGGTG GTGCCCAGCA ACGTCTTCGC GGTGTCGTCG
GTGCAACTGG TGGACCGCAG CGGGGGCCCG CCGATCCAGT CGGGCGCCCG GATCCCGGAG
GACACCGAGC TGCCGACGGT GCTGTTCCAG ACCACGATCA GCAAGTTGCG CGACATCCTC
GCCGCCACCG GACGGGGTCG CGAGGACGAC ACGGTCGGCA TCCTGGCCGC GGTCAACGCC
GCCACCGAGG ACCGCCGTAC CGAATTGCTC ACCAGCGGTG CGCAACTCAA CAGTCTGGTC
GACGAGCTGG ACCGGATCGT TGCCACCGAT CCCGGCCCGA CCACGGTGTC GGCTCTCGTC
GACGCCACCC GCGGGTTGCA GCAGACCGCA CCGGAACTGG TCGACGCGCT GCACCAGGCC
GTCGAGCCGA TGCAGACGCT CGTCGAGCAG AGCGCCCAGC TCACCACGTT CATCAATGGC
GGAATCAACA CGGTGGGCAC CACGCACACG GCGCTGAACA ACCACACCGA CCGGATGGTG
CGGATCACCA CGGAGCTGAC CCCGGTGATC GGCAACCTGG CGCAGACCTC GCACCACTGG
GTGCCGGCCT TCGTGAAGCT CAACGGGTTG TCGCGCAAAT TCTTCGACGA GGTCTGGATG
CACGATCGCG ACGTCGGGAA CATGCGGGTG AACCTGTCGT TCACGCCCAC CTACTCCTAC
ACCCGTGCGG ACTGCCCGCA GTACGGCGAA CTCAAGGGGC CGAGCTGTTT CACCGCGCCG
CTGGTCCCGA CGCGGCCCGA GCTGCCGGAT GTTCTGCTGC CGCAGAACTA CCAGCCACCC
GCGGACCTCA AGCCACCGCC GGGCACCGAG GTCGGTCCCA ACGGCAACCT GGTCGCGGTG
GGTCCGCCGC TGGTGAACCC GAATCCCGAT CTGCGGGACC CGAATCCGCC GTTGCCGCCG
TGGCTGAGTC CGTCCCCGCC CGTGCCCGGT ACCGCGAATC CGGCGCTGGT CCCGGTGCCG
CAGCCGCCGG TTCCGTTGTC CCCGCCGGCG CCGGTCGCCC CCAAACCGGG TGACCCGCCC
CCGCCGCCGG CTGCACCGCC GGTGTCAGGA CCCGCTCCGC TGCCCGCCGA GGCCGCGCCT
GCCGGCTATG GCGGCAACGT CGGTCCGGTC GGCAGCCGCC ACGAACTCGA TCAGCTCGGC
TACATCACCG GGCAGCCCGC CACCGTCGCC ACCCAGCTGC TGCTCGGCCC GGTGGCCCGG
GGAACCACGG TCAGCGAGGG AGTTCGATGA
|
|---|
| Protein sequence | MANSLEMDGR GPTDRQLLAC GVALLVIALV VSGALLVKST GRMDAHVRVV AALVNVGDGL
PQRSDVKYHG VLVGAVDDVT PAQYGDPNFV HIDLKPEYAA SIPAGVTARV VPSNVFAVSS
VQLVDRSGGP PIQSGARIPE DTELPTVLFQ TTISKLRDIL AATGRGREDD TVGILAAVNA
ATEDRRTELL TSGAQLNSLV DELDRIVATD PGPTTVSALV DATRGLQQTA PELVDALHQA
VEPMQTLVEQ SAQLTTFING GINTVGTTHT ALNNHTDRMV RITTELTPVI GNLAQTSHHW
VPAFVKLNGL SRKFFDEVWM HDRDVGNMRV NLSFTPTYSY TRADCPQYGE LKGPSCFTAP
LVPTRPELPD VLLPQNYQPP ADLKPPPGTE VGPNGNLVAV GPPLVNPNPD LRDPNPPLPP
WLSPSPPVPG TANPALVPVP QPPVPLSPPA PVAPKPGDPP PPPAAPPVSG PAPLPAEAAP
AGYGGNVGPV GSRHELDQLG YITGQPATVA TQLLLGPVAR GTTVSEGVR
|
|---|
| |