| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0946 |
|---|
| Symbol | |
|---|
| ID | 4645853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 976629 |
|---|
| End bp | 977552 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639804446 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_951790 |
|---|
| Protein GI | 120401961 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.233091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTG ATCAGCTGTC GGACGTCTTC GACCTCATCG AGGTGGCGGG GATGGTGTCC
GGCGGGTTCT CGGTGCGCGG GGACTGGTTC TGCAGGCTGG AGATCAAGGA TCCGGTCAAG
ATGATCGGGG TGGTCTGCGG CCGCGTCCGG CTCGCCACCG ACGGATACGG CCCGATCGAC
CTCGAACCGG GTGACGTCGC GATTCTCAAC GGCTGCACAC AGGTGGTGCT CAAGGGCGGT
CCGGGCGCGG CGCCCGCGAC GAAGCTCGAC GTCGAGCAGT CCGGGGATGC CTTCGTGCGG
GTCGACGGCG CCGAATGCGG TGAGGCCGAC GTCATCATCG GTGGCCACGT CGACGTGAAC
CCGACCGGGG CGGCGCTGCT GGCGCAGGCC CTGCCGCGGG TGGGGTTGGT GCGGGCGTCG
GCCGACGAGG CCACCAACCT GCACGCGATC CTCAACCGGG TGCTCGACGA GGTGACGGGC
AATCGCATCG GGTCGGCATT CGCCGTGCAG CAGCAGGGCC AACTCCTGCT CCTGGAGGTG
CTGCGGGCCT ACCTCGCACA GGCGGACGAC CTGCCGCCGG GATGGCTGCG ACTGCTCACC
GACGAGCGGC TGCGTCCCGC CGTCACGTCG ATGCACGACG AACCCGGAAA GCCTTGGCGG
CTTGAGGAAC TCGCGCGAGC CGCGGCGATG TCGCGCACGT CGTTCGCGGA GCGCTTCCGC
GCTGTCGCCG GTGTGCCGCC GCTGACCTAC CTCAACGCCT GGCGCATGCA GCTCGCCCGG
CACGCGCTGC GCGACAGCGA CACCAGGGTG GGGCCCTTGG CGTTCCGGCT GGGCTACACC
TCGGAGAGCG CATTCAGCAA CGCGTTCAAG CGCGAGGTGG GGATGTCGCC GCTGCGCTAC
CGCGCCAGCG TCCAGGCCGT GTGA
|
|---|
| Protein sequence | MKRDQLSDVF DLIEVAGMVS GGFSVRGDWF CRLEIKDPVK MIGVVCGRVR LATDGYGPID
LEPGDVAILN GCTQVVLKGG PGAAPATKLD VEQSGDAFVR VDGAECGEAD VIIGGHVDVN
PTGAALLAQA LPRVGLVRAS ADEATNLHAI LNRVLDEVTG NRIGSAFAVQ QQGQLLLLEV
LRAYLAQADD LPPGWLRLLT DERLRPAVTS MHDEPGKPWR LEELARAAAM SRTSFAERFR
AVAGVPPLTY LNAWRMQLAR HALRDSDTRV GPLAFRLGYT SESAFSNAFK REVGMSPLRY
RASVQAV
|
|---|
| |