| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0925 |
|---|
| Symbol | |
|---|
| ID | 4645282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 953722 |
|---|
| End bp | 955005 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639804425 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_951769 |
|---|
| Protein GI | 120401940 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAAAC GCAAATGGGC GCTGGGTGTG GCCGTCGCAC TCGTGCTGGT ACTCGTGGGT
GGAGTCGTGG CGGCCATCCG AATATCGAAC GTCGGCAACC GCACTCACGT CACCGCCTAC
TTCACCAACA GCACGGGCAT CTACACCGGC GACGACGTGC GCATCCTGGG CGTGCGTGTC
GGGCAGATCG ACACGATCGA AGCCCAGCCA GAACAGGTGA AGATCACCTT CTGGGTCGAC
GACCGCTACA AGATCCCGGC AGACGCCCAG GCGGTGATCC TGTCGCCCTC CCTGGTGTCG
GCACGCGCCA TCCAACTCGT GCCGGCGTAT GACGGTGGAC CGGTCATGCC GACCCAGGCG
GTGATTCCTC TGGAGCGCAC CGCCGTACCG GTCGAGTGGG ACGACCTACG GGGACAACTC
CAGAAACTCG TCGACGCCCT GCAACCTACC CAGCCCGGCG GCATCAGCAC AGTGGGTGCA
TTCGTCAACA TGGCCGCCGA GAACCTCCGT GGCTCGGGTG CGGACATCCA CGACACGATC
ATCCAGCTTT CCCAGGCGTT CTCGGCGCTC GGCGACCACA GCGACGACGT GTTCGCCACG
ATCCGGGACC TCTCCCTCGT CGTCACGGCA CTTCAGGAGA GTAAGGACGT GCTGCGGGCA
CTCAATGACA ATCTCGCGGC CACGACGGCT CTGCTCGCCA ATCAACCCGG CGAGGTCGAC
CGGGCGATCG CCGACATCAA CGACGTCGTC ACAGAGGTGA CCGGCTTCGC CGCCGAGAAC
CGCGAGCCGG TCGGTACCGC ATCAGACCTG CTGGCCTCGA TCAGCGACAC GCTCAACCGG
AGTCTCGACG ACATCAAGCA GACCCTGCAC GTCGCGCCCA CCCAGCTGGC CAACTTCGTC
AACATGTACC CGCCGGCCGT GGGCGGCTTC GCCGGCGCCT TCAGTCTCAA CAACTTCGCC
AACCCGATCC AGTTCCTGTG CGGCGCCATC GAGGCAGCAT CCCGGCTCGG CGCCGAACAG
GCCGCCAAGC TGTGTGTGCA ATACCTGGCG CCCATCGTGA AGAACCGTCA GTACAACTTT
CCCCCGCTGG GCATCAATCC CGTGGTGGGC GCCGTCGCCC GCCCGAACGA GATCACCTAC
AGCGAGGATT GGCTGCGGCC CGACTACGTC CCGCCGCCCC AGGCGCCCCT GAACGACCCG
GCGCCGGTGG AATCACCACT GCCCGCTGAG GCGCCTGCTA CAAATCTGCA GGACATGCTG
CTGCCCGCCG GAGCCGGATC ATGA
|
|---|
| Protein sequence | MTKRKWALGV AVALVLVLVG GVVAAIRISN VGNRTHVTAY FTNSTGIYTG DDVRILGVRV
GQIDTIEAQP EQVKITFWVD DRYKIPADAQ AVILSPSLVS ARAIQLVPAY DGGPVMPTQA
VIPLERTAVP VEWDDLRGQL QKLVDALQPT QPGGISTVGA FVNMAAENLR GSGADIHDTI
IQLSQAFSAL GDHSDDVFAT IRDLSLVVTA LQESKDVLRA LNDNLAATTA LLANQPGEVD
RAIADINDVV TEVTGFAAEN REPVGTASDL LASISDTLNR SLDDIKQTLH VAPTQLANFV
NMYPPAVGGF AGAFSLNNFA NPIQFLCGAI EAASRLGAEQ AAKLCVQYLA PIVKNRQYNF
PPLGINPVVG AVARPNEITY SEDWLRPDYV PPPQAPLNDP APVESPLPAE APATNLQDML
LPAGAGS
|
|---|
| |