| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0923 |
|---|
| Symbol | |
|---|
| ID | 4645280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 951381 |
|---|
| End bp | 952412 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639804423 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_951767 |
|---|
| Protein GI | 120401938 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.771537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG ACTCGCTGTC AGCGACCATC TGGCGGCTCG CAATCTTCGT CTGCGTGTGC
CTGCTCGGCT TGTCCCTCCT CGTCGCGGTG TTCGGTCAAC TGCGCTTCGA GCCTCGCCGC
GGCTTCACCG CCGAGTTCAC CAATGTGGGT GGACTCAAAA GCGGAGACTT CGTCCGCATA
GCTGGTGTGG AGGTCGGGAA GGTGGGCGAT TTGAGTCTGC GACCCGACGC CGCGGTGAAT
GTCTCGTTCA CAGTCGATGA TTCGGTTCAA CTCCTGGACA ACACGCGGGC GGTGATCCGC
TATGACAATC TGTACGGCGA CCGCTACCTG GCGATTGAAC AAGGTGAAGG TGAGGGCAGA
CCCCTTGCGC CCGGTGGCAT CATCCCGTTC ACGCAAACCG CACCGGCCCT CGATCTCGAC
ACGTTGATCG GCGGCTTTCG GCCACTGTTC CGCGCATTGG ATCCCGATCA GGTGAACGCG
CTGTCATCTC AGTTGATCCA GGCCTTTCAG GGGCAAGGTG ACACCATCGG CTCCGTACTG
ACCCAGACCG CTGCGCTGAC CAACACCCTG GCAGATCACG ACGCCTTGAT CGGCGATGCA
ATCACCAACC TCGACACCGT GTTCGGCACT CTCGCCGACA ACAATGCCGA ACTCGGCCAG
GCCATCGACA CTTTCGCCTC CCTGACAGAG TCGCTTGCCG AGCGGAGAAC GGATATCAGC
AACTCCGTGG CCTATACGAA CGCAGCTGCC GGGTCGCTGG CCGACCTACT GGAACGTTCG
CGGCCTGCGC TGCAGAAGAT CACCCATGAG ACCGACCGCA CTGCCGGCAT CGTCCTCGAC
GAGGACGACT ACGTCGACAA CCTCCTCGAG ACCTTGCCCG ACGCTTACAA GAAGCTGGGA
CGGCAAGGGC TCTACGGGGA TTGGTTCGCA TTCTACGTCT GCGAGGTCGT GTTCAAGGTG
AACGGTAAAG GCGGCCAACC TGTCTATATC AAGGCCGCCG GTCAATCCTC AGGCAGGTGC
ACACCGCGAT GA
|
|---|
| Protein sequence | MMKDSLSATI WRLAIFVCVC LLGLSLLVAV FGQLRFEPRR GFTAEFTNVG GLKSGDFVRI
AGVEVGKVGD LSLRPDAAVN VSFTVDDSVQ LLDNTRAVIR YDNLYGDRYL AIEQGEGEGR
PLAPGGIIPF TQTAPALDLD TLIGGFRPLF RALDPDQVNA LSSQLIQAFQ GQGDTIGSVL
TQTAALTNTL ADHDALIGDA ITNLDTVFGT LADNNAELGQ AIDTFASLTE SLAERRTDIS
NSVAYTNAAA GSLADLLERS RPALQKITHE TDRTAGIVLD EDDYVDNLLE TLPDAYKKLG
RQGLYGDWFA FYVCEVVFKV NGKGGQPVYI KAAGQSSGRC TPR
|
|---|
| |