Gene Mvan_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0893 
Symbol 
ID4643615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp920473 
End bp921153 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content66% 
IMG OID639804393 
Productisochorismatase hydrolase 
Protein accessionYP_951737 
Protein GI120401908 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.189263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCTC GGGAACCCGC TGCCGCCGCG GCGCCGAGCC TCGGCGGACC AGTCGAAGTC 
GACCCCAAAG AGTGTGCGCT GCTGGTCACG GGATGCCAAC ACGGGGTCCT CGACAGCCTG
CCAGACGCCG ACAACCTCGT CCTGAAGATC AACGCGGCGA TCGACATCGT CCGCCTACAC
GGTGGCCACA TCGTGTTCGC CCGAATGGCT TTCGACGATC TGGACTTCAG GTTCACCCCG
ACCACCAACT GCGAGTTCTC CGCCCTGGCC CGGGAAGGAC GTTTCCGCGA CCGGACGCCG
GAGTCAGCCG TTCATCAGGC GGCAGCGGTC AAGCCCACCG ACGTCATGGT TCGCACGACC
CGCCTCGGCG CATTCTCGAC CACGGATCTC GACGAACAGC TGACCAACCT GGGTGTGACG
ACGCTGATCG TCGCGGGCGC GCACACCAGC GGAACCGTCT TGTCCACCGT GCGCGAAGCC
GCCGACCGGG ACTACCGCCT CATCATCCTG TCCGACTGCT GCGCCGATCC GGACACCGAG
AACCACCGAT TCCTGATGAC GCGGATCTTT CCGCGGCAAG CCGAGATCAC CACCGCCACC
GAGCTCTACC TGTCCCTGGC CGCCGACAAG GCGGACCGGC AACGGAACTC GGCAACGGGT
CACACAGCCC ATGCAGGGTA G
 
Protein sequence
MEAREPAAAA APSLGGPVEV DPKECALLVT GCQHGVLDSL PDADNLVLKI NAAIDIVRLH 
GGHIVFARMA FDDLDFRFTP TTNCEFSALA REGRFRDRTP ESAVHQAAAV KPTDVMVRTT
RLGAFSTTDL DEQLTNLGVT TLIVAGAHTS GTVLSTVREA ADRDYRLIIL SDCCADPDTE
NHRFLMTRIF PRQAEITTAT ELYLSLAADK ADRQRNSATG HTAHAG