Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0782 |
Symbol | |
ID | 4643578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 821507 |
End bp | 822166 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639804282 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_951626 |
Protein GI | 120401797 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGGCT ACCATCTCGC CGAGATGACC ACCACGTCAG CCGACGAGGC CGACCTCATC GCCGCCCTCC GGGCGCGCGA TGAGGTCGCG TTCGCCCGCC TGGTCGATCA GCACACCCCC GCGATGCTGC GGGTGGCCCG CGGATACGTG GCCAGCCACG AGGTCGCCGA AGAAGTGGTG CAGGAGACGT GGATCGCACT ACTGAAGGGA ATCGACCGTT TCGAAGGCCG ATCCTCTTTG CGCACATGGC TTTTCACCGT GATGATCAAC ATCGCCAAGA CCCGCGGCCT GCGCGACCGC ACCGACGCCG ACGTCCAGAT CGCCGCCTAC ACCGGCGGCA CGGTGGATCC GAAGCGGTTC CGCGACAGCG ACGATCCCTG GCCCGGTCAC TGGAAAGCCG ACGAGGTTCC GTCGCCGTTT CCGGATACTC CGGAAGGGTC GGTGCTCGGC GGCGAGCTGT TGGCGGTCAC CCGACGGGAA CTGGCCAAGC TTCCGGAGCG CCAACGCCTG GTGGTCACCA TGCGCGATGT GCTCGACATG GACTCGGCCG AGGTGAGCCG CCTGCTGGAT CTCAGCCCGG CCAACCAGCG GGTGCTTCTG CACCGAGGCC GGGCCGCGGT GCGGCAGGCG CTGGAGAACT ACCTGAAGGA GCCGGTGTGA
|
Protein sequence | MTGYHLAEMT TTSADEADLI AALRARDEVA FARLVDQHTP AMLRVARGYV ASHEVAEEVV QETWIALLKG IDRFEGRSSL RTWLFTVMIN IAKTRGLRDR TDADVQIAAY TGGTVDPKRF RDSDDPWPGH WKADEVPSPF PDTPEGSVLG GELLAVTRRE LAKLPERQRL VVTMRDVLDM DSAEVSRLLD LSPANQRVLL HRGRAAVRQA LENYLKEPV
|
| |