Gene Mvan_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0782 
Symbol 
ID4643578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp821507 
End bp822166 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID639804282 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_951626 
Protein GI120401797 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGCT ACCATCTCGC CGAGATGACC ACCACGTCAG CCGACGAGGC CGACCTCATC 
GCCGCCCTCC GGGCGCGCGA TGAGGTCGCG TTCGCCCGCC TGGTCGATCA GCACACCCCC
GCGATGCTGC GGGTGGCCCG CGGATACGTG GCCAGCCACG AGGTCGCCGA AGAAGTGGTG
CAGGAGACGT GGATCGCACT ACTGAAGGGA ATCGACCGTT TCGAAGGCCG ATCCTCTTTG
CGCACATGGC TTTTCACCGT GATGATCAAC ATCGCCAAGA CCCGCGGCCT GCGCGACCGC
ACCGACGCCG ACGTCCAGAT CGCCGCCTAC ACCGGCGGCA CGGTGGATCC GAAGCGGTTC
CGCGACAGCG ACGATCCCTG GCCCGGTCAC TGGAAAGCCG ACGAGGTTCC GTCGCCGTTT
CCGGATACTC CGGAAGGGTC GGTGCTCGGC GGCGAGCTGT TGGCGGTCAC CCGACGGGAA
CTGGCCAAGC TTCCGGAGCG CCAACGCCTG GTGGTCACCA TGCGCGATGT GCTCGACATG
GACTCGGCCG AGGTGAGCCG CCTGCTGGAT CTCAGCCCGG CCAACCAGCG GGTGCTTCTG
CACCGAGGCC GGGCCGCGGT GCGGCAGGCG CTGGAGAACT ACCTGAAGGA GCCGGTGTGA
 
Protein sequence
MTGYHLAEMT TTSADEADLI AALRARDEVA FARLVDQHTP AMLRVARGYV ASHEVAEEVV 
QETWIALLKG IDRFEGRSSL RTWLFTVMIN IAKTRGLRDR TDADVQIAAY TGGTVDPKRF
RDSDDPWPGH WKADEVPSPF PDTPEGSVLG GELLAVTRRE LAKLPERQRL VVTMRDVLDM
DSAEVSRLLD LSPANQRVLL HRGRAAVRQA LENYLKEPV