| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0764 |
|---|
| Symbol | groEL |
|---|
| ID | 4643560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 805511 |
|---|
| End bp | 807136 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639804264 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_951608 |
|---|
| Protein GI | 120401779 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.761225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.671029 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA TTATTGCGTA TGACGAAGAG GCCCGCCGCG GCCTCGAGCG GGGCCTCAAC
GCCCTCGCCG ACGCCGTAAA GGTGACGTTG GGCCCCAAGG GTCGCAACGT CGTGCTCGAG
AAGAAGTGGG GCGCCCCCAC GATCACCAAC GATGGTGTGT CCATCGCCAA GGAGATCGAG
CTGGAGGATC CCTACGAGAA GATCGGCGCT GAGCTGGTCA AGGAAGTTGC CAAGAAGACT
GACGACGTCG CCGGCGACGG CACCACCACC GCCACCGTGC TCGCACAGGC GCTGGTCCGT
GAGGGCCTTC GCAACGTGGC CGCCGGCGCC AACCCGCTCG GCCTCAAGCG CGGCATCGAG
AAGGCCGTCG AGAAGGTCAC CGAGACGCTG CTGAAGTCGG CCAAGGAGGT CGAGACCAAG
GAGCAGATCG CTGCCACCGC CGCGATCTCG GCCGGCGACA CCCAGATCGG CGAGCTCATC
GCCGAGGCCA TGGACAAGGT CGGCAACGAG GGTGTCATCA CCGTCGAGGA GAGCAACACC
TTCGGCCTGC AGCTCGAGCT CACCGAGGGT ATGCGCTTCG ACAAGGGCTA CATCTCGGGT
TACTTCGTGA CCGATGCCGA GCGCCAGGAA GCCGTCCTGG AGGATCCCTA CATCCTGCTG
GTCAGCTCCA AGGTGTCGAC CGTCAAGGAT CTGCTGCCGC TGCTGGAGAA GGTCATCCAG
GCCGGTAAGC CGCTGCTGAT CATCGCCGAG GACGTCGAGG GCGAGGCCCT GTCGACCCTG
GTGGTCAACA AGATCCGCGG CACCTTCAAG TCCGTCGCCG TCAAGGCTCC GGGCTTCGGT
GACCGTCGCA AGGCCATGCT GCAGGACATC GCGATCCTGA CCGGTGGCCA GGTCGTCAGC
GAAGAGGTCG GTCTGTCTCT GGAGACCGCC GACGTCGCGC TGCTGGGCAC CGCCCGCAAG
GTCGTCGTCA CCAAGGACGA GACCACCATC GTCGAGGGTG CCGGTGATTC CGACGCCATC
GCCGGCCGGG TGGCCCAGAT CCGTGCCGAG ATCGAGAACA GCGACTCCGA CTACGACCGC
GAGAAGCTGC AGGAGCGCCT GGCCAAGCTG GCCGGCGGTG TTGCGGTGAT CAAGGCCGGG
GCTGCCACCG AGGTGGAGCT CAAGGAGCGC AAGCACCGCA TCGAGGACGC CGTCCGCAAC
GCGAAGGCTG CCGTCGAGGA GGGCATCGTC GCCGGTGGCG GCGTGGCCCT GCTGCAGTCG
GCTCCTTCGC TCGACGAGCT GAACCTGACG GGTGATGAGG CCACTGGCGC CAACATCGTC
CGTGTGGCTC TGTCGGCTCC GCTGAAGCAG ATCGCCTTCA ACGGTGGTCT GGAGCCCGGT
GTGGTCGCCG AGAAGGTCAC CAACCTGCCC GCGGGTCACG GCCTCAACGC CGCGACCGGC
GAGTACGAGG ACCTGCTCAA GGCCGGCGTC GCCGACCCGG TGAAGGTCAC CCGCTCGGCG
CTGCAGAACG CGGCGTCCAT CGCGGCGCTG TTCCTCACCA CCGAGGCCGT CGTCGCCGAC
AAGCCGGAGA AGGCCGCCGC ACCTGCGGGC GACCCGACCG GTGGCATGGG CGGCATGGAC
TTCTAA
|
|---|
| Protein sequence | MSKIIAYDEE ARRGLERGLN ALADAVKVTL GPKGRNVVLE KKWGAPTITN DGVSIAKEIE
LEDPYEKIGA ELVKEVAKKT DDVAGDGTTT ATVLAQALVR EGLRNVAAGA NPLGLKRGIE
KAVEKVTETL LKSAKEVETK EQIAATAAIS AGDTQIGELI AEAMDKVGNE GVITVEESNT
FGLQLELTEG MRFDKGYISG YFVTDAERQE AVLEDPYILL VSSKVSTVKD LLPLLEKVIQ
AGKPLLIIAE DVEGEALSTL VVNKIRGTFK SVAVKAPGFG DRRKAMLQDI AILTGGQVVS
EEVGLSLETA DVALLGTARK VVVTKDETTI VEGAGDSDAI AGRVAQIRAE IENSDSDYDR
EKLQERLAKL AGGVAVIKAG AATEVELKER KHRIEDAVRN AKAAVEEGIV AGGGVALLQS
APSLDELNLT GDEATGANIV RVALSAPLKQ IAFNGGLEPG VVAEKVTNLP AGHGLNAATG
EYEDLLKAGV ADPVKVTRSA LQNAASIAAL FLTTEAVVAD KPEKAAAPAG DPTGGMGGMD
F
|
|---|
| |