Gene Mvan_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0707 
SymbolthiE 
ID4643650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp749750 
End bp750415 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID639804207 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_951551 
Protein GI120401722 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0698671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGAAT CCCGCAAGCT CGACAGCGCT GCGCTGTACC TGTGTACCGA TGCCCGCCGC 
GAACGCGGCG ACCTGGCCGA ATTCGCCGAT GCGGCACTGG CGGGCGGTGT CGACATCATT
CAGCTGCGCG ACAAGGGCTC GGCGGGCGAG CAGCGGTTCG GCCCGCTGGA GGCGCGCGAG
GAGATCGAGG TGCTCGCCAC GCTCGCCGAT GCGGCACGCC GCCACGGCGC CCTGTTCGCG
GTCAACGACC GCGCCGACAT CGCGCTCGCC GCGGACGCCG ACGTGCTGCA CCTGGGCCAG
GACGATCTGC CGCTGACCGT GGCGCGCCGC ATCGTCGGGG ACCGCATCGT GGGCCGCTCG
ACCCACGACC TGGACCAGGT CAGGGCCGCG GTGGGCGAAG ATGTCAACTA CTTCTGTGTG
GGCCCGTGCT GGCCGACGCC GACGAAACCG GGCCGTCCCG CACCGGGACT GGACCTGATC
AGGGCGACCG CCGCGTTGGG CACCGACAAG CCGTGGTTCG CGATCGGCGG CATCGACGCG
GAGCGTCTCC CGGAAGTGCT CGACGCCGGG GCGCGCCGCG TGGTCGTGGT GCGGGCCATC
ACCGCGGCAG ACGACCCGGG GGCCGCGGCC CAACGGCTCG CCGGGATGCT CAGCGCTGCG
GGTTGA
 
Protein sequence
MRESRKLDSA ALYLCTDARR ERGDLAEFAD AALAGGVDII QLRDKGSAGE QRFGPLEARE 
EIEVLATLAD AARRHGALFA VNDRADIALA ADADVLHLGQ DDLPLTVARR IVGDRIVGRS
THDLDQVRAA VGEDVNYFCV GPCWPTPTKP GRPAPGLDLI RATAALGTDK PWFAIGGIDA
ERLPEVLDAG ARRVVVVRAI TAADDPGAAA QRLAGMLSAA G