| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0663 |
|---|
| Symbol | |
|---|
| ID | 4647321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 708625 |
|---|
| End bp | 709269 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639804163 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_951507 |
|---|
| Protein GI | 120401678 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.509405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC TGCCCGGTCC CACCGAATGG GGTGGGGGCC ACGGAGTGGG GCCATGGCAG
GGCCCGCCGC CCGACGACCC GCGCCTCGAC CCCGAATTGC TGCGTGCCGG AGATACCCGC
AACGTCGTTG ACGCATACCG GTACTGGACC CGGGATGCCA TCATCGCCGA CATCGACGCG
CGCAGACACC CGCTGCACAT CGCGATCGAG AACTTCGGCA ACGACGCCAA CATCGGTTCG
GTGGTGCGCA CGGCGAACGC GTTCGCCGTG CACACCGTGC ACATCGTCGG CCGGCGCCGG
TGGAACCGGC GCGGAGCCAT GGTGACCGAC CGTTACCAGC GGCTGTGTCA CCACGACACC
ACCGCCGAGC TGCTCGACTT CGCCACCCGC GCAGGCCTGA CGGTCGTCGC CGTCGACAAC
GTGCCGGGTG CGTCCCGCAT CGAGGAGGCC TCGCTGCCGC GGGATTGCCT GCTGATCTTC
GGCCAGGAAG GGCCGGGCAT CACAGACGAT GCGAAAGCCG GTGCACCGCT AACTGTTTCG
ATCGCCCAGT TCGGCTCCAC CCGGAGCATC AACGCGGGCG TCGCGGCCGG GATCGCGATG
CACGCCTGGA TCCGCCAGCA CGCCGACCTC GGCCGCGCCT GGTGA
|
|---|
| Protein sequence | MTDLPGPTEW GGGHGVGPWQ GPPPDDPRLD PELLRAGDTR NVVDAYRYWT RDAIIADIDA
RRHPLHIAIE NFGNDANIGS VVRTANAFAV HTVHIVGRRR WNRRGAMVTD RYQRLCHHDT
TAELLDFATR AGLTVVAVDN VPGASRIEEA SLPRDCLLIF GQEGPGITDD AKAGAPLTVS
IAQFGSTRSI NAGVAAGIAM HAWIRQHADL GRAW
|
|---|
| |