Gene Mvan_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0565 
Symbol 
ID4644301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp606816 
End bp607538 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID639804068 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_951413 
Protein GI120401584 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGAA CAGTCGACGC ATCGACCCGC GCCTGTGTCG AGCACCTCGA CCGGGGCCCG 
CTCGACCGTC GGGAGATCGC CGCGATGATC GCCCGCGACA TCCCCGCGGG TTCGTACGTC
AACCTCGGCA TCGGGCAGCC CACCATGGTC GCTGACTTCC TGGACCCCGC CGCGGGGGTC
GTGTTGCACA CCGAGAACGG GATGCTCGGG ATGGGTGGGG AGGCGATCGG CGACGCAATC
GATCCGGATC TGACGAACGC CGGCAAGATC CCGGTTACCG AAACCCCTGG GGCATCCTAC
TTCCACCACG CCGACTCCTT CGCCATGGTG CGCGGCGGTC ATCTCGATGT CTGTGTCCTC
GGCGCGTTTC AGGTCAGCGA GCGCGGGGAT CTCGCCAACT GGCACACCGG GGCGCCTGAC
GCCATACCCG CCGTCGGCGG CGCGATGGAT CTTGCTATCG GCGCGAAGAG CGTATTGGTC
ATGATGACCC TGTTCGCAAA GGACGGAACC GCCAAACTGG TTCCTTCGTG CAGCTATCCA
CTGACCGGAC TTCGATGCGT CAATCGGGTG TACACCGACT ATGCCGTGTT TGACATCGAC
CACACCGGTG GCGGCCAGCT GCGGGTCTTG CACACGTTCG GGCTCAGCAT TGCCGCGCTC
GAGGAGCGGC TGCGCATGGC ACTCTCGTGT GATGGACGCG TCGCTGATCT TCGTCAATGC
TGA
 
Protein sequence
MTRTVDASTR ACVEHLDRGP LDRREIAAMI ARDIPAGSYV NLGIGQPTMV ADFLDPAAGV 
VLHTENGMLG MGGEAIGDAI DPDLTNAGKI PVTETPGASY FHHADSFAMV RGGHLDVCVL
GAFQVSERGD LANWHTGAPD AIPAVGGAMD LAIGAKSVLV MMTLFAKDGT AKLVPSCSYP
LTGLRCVNRV YTDYAVFDID HTGGGQLRVL HTFGLSIAAL EERLRMALSC DGRVADLRQC