Gene Mvan_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0523 
Symbol 
ID4644848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp565005 
End bp566465 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID639804028 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_951373 
Protein GI120401544 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGAAA CTGTTGTCGA ACGACTGAGC CGCCGGCACA AGGCCTTCGT CCTGGCGTCC 
TGCTGCCTGA GCGTGCTCAT TGTGTCGATC GACGTGACCA TCGCCAACGT TGCAATCCCG
AGCATCCGCG CCGACCTTTC GGCGTCGCCT TCGCAAATGC AGTGGGTCAT TGACATCTAC
ACCTTGATGG TGGCCTCGCT ATTGCTGCTC TCGGGTGCCA TGGCCGACCG ATTCGGTCGG
CGGCGTACGT TGCAGATCGG GTTGACAATC TTTGCGTCGG CCTCCCTACT GTGCAGCGTG
GCTCCCAACG TCGAAACGCT GATCGGCGCC CGCTTCCTGC AGGCGATCGG CGGTTCGATG
CTCACTCCTG CTGGGTTGTC GATCGTCACG CAGGTGTTCA CCGGCAGAGT GGAGCGCGCG
CGCGTCATCG GCATATGGGG GGGCGTCGTA GGCATCTCGA TGGCCTTGGG TCCGATCATG
GGCGGAATAC TTCTCGAGTA TGTTGACTGG CGAGCAGTGT TCTGGATCAA CGTGCCGATC
TGCGCGCTTG CGGTGCTGTT GACCGCGATC TTCGTTCCCG AATCCAAGTC GGTCACCATG
CGCCACGTCG ACCTGATCGG CTTGGTCCTG GGCATGGCCT TCCTGTTCGG ACTGGTGTTC
GTGCTCATCG AAGGGCCAGG GATGGGCTGG ACCGACACCC GCGTCGTCGT TAGCTGTTGC
CTCGCAGCGC TGGCCTTCGC GACATTCCTG CGCTACGAGT CACGCCGCCT CGACCCGTTC
GTCGAGCTCC GATTCTTCCG CAGCATCCCG TTTGCTTCGG CGACGGCCAT CGCGGTGTGC
GCATTCGCTG CATGGGGCGC GTTCCTGTTC ATGATGTCAA TCTATTTGCA AGGGGAGCGC
GGGCTTTCAG CGGTGAACAC CGGGCTGATG TTTCTGCCCG TGGCCGTCGG CGCATTCATC
TTCTCGCCCT TGTCTGGCCG GCTGGTGGGG CGATTTGGTG CCAGACCGTC GCTGATGATC
GCCGGCGCAT TGATCGTCGC CGCGACTCTC ATGTTCGCGC AGATGAGCGA CGCTACCCCG
CAATGGCAAA TGCTGGTCGC CTTTGCGGTT TTCGGCGTCG GTACTTCGAT GGTGAACGCA
CCGGTCACAA CCGCGGCCGT CAGCGGTATG CCGACCGACC GCGCCGGTGC GGCGGCGGCT
ATCACATCCA CGAGCCGACA GGTGGGCGTC GCCATCGGTG TGGCCATATG CGGCCCGGTC
GCTGGTGCGG CATTGGGCGA CACCAACGTC GATTTCGCGG TCTCCGCCCA GCCCCTATGG
CTAGTGTTCG CTGGAGTTGG TGTGCTGATC TTCACGCTCG GTGTCTACTC GACGTCGAAG
CGCGCGCTGC GCTCAGCAGA GCATCTGGCG CCGCTGATCG CAGGAACCGA TCCGCGACGG
GAGGCTGCCG ATGTCGCGTA A
 
Protein sequence
MNETVVERLS RRHKAFVLAS CCLSVLIVSI DVTIANVAIP SIRADLSASP SQMQWVIDIY 
TLMVASLLLL SGAMADRFGR RRTLQIGLTI FASASLLCSV APNVETLIGA RFLQAIGGSM
LTPAGLSIVT QVFTGRVERA RVIGIWGGVV GISMALGPIM GGILLEYVDW RAVFWINVPI
CALAVLLTAI FVPESKSVTM RHVDLIGLVL GMAFLFGLVF VLIEGPGMGW TDTRVVVSCC
LAALAFATFL RYESRRLDPF VELRFFRSIP FASATAIAVC AFAAWGAFLF MMSIYLQGER
GLSAVNTGLM FLPVAVGAFI FSPLSGRLVG RFGARPSLMI AGALIVAATL MFAQMSDATP
QWQMLVAFAV FGVGTSMVNA PVTTAAVSGM PTDRAGAAAA ITSTSRQVGV AIGVAICGPV
AGAALGDTNV DFAVSAQPLW LVFAGVGVLI FTLGVYSTSK RALRSAEHLA PLIAGTDPRR
EAADVA