| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0458 |
|---|
| Symbol | |
|---|
| ID | 4648254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 499316 |
|---|
| End bp | 500332 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639803966 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_951311 |
|---|
| Protein GI | 120401482 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAATC CAGAGGTTCC TGAATCTGAT TCCGATGTTG CGGCACGGGT CACGGTCGAG
ATCCGTCTGC GTGCTGTCAC TGAAGTCAAC GACGGCGCAC CCGTTGGTGA GGTCGCCGAA
CGGTACGGCG TCACGCGGCA GACGGTCACG GCGTGGCGCA AACGCTACGA GGCCGGTGGC
CTGGAGGCTT TGGCCGATCA GTCGCGTCGC CCGCATTCCA GCCCGGGCCG GATCTCTCCC
GATGTCGAAG CGTTGATCTG CGAAATGCGC CGCCACCATC GACGCTGGGG AGCCCGACGC
ATCGCGTACG AACTAAAGCT CGAAATCGGC AAACAAGCCC CGTCGCGATC CACGACCCAC
CGCGTTCTGG TGCGCAATGG TTTGGTGAAT AGCCAAGAGC AGCAACATAA ACGAGTCTAC
AAGCGGTGGG CACGCGAAGC GCCGATGCAT CTGTGGCAAC TCGACATCGT CGGCGGAGTG
TTCCTGGTCA ACGGCCGCGA GCACAAGATG CTCACCGCCA TCGACGACCA TTCCCGGTTC
GTCGTCGCCG CCGCCGTCTT ACCTGTGCCG TCCGGTCCTG CGGTGTGTGA TGCGTTCCTG
GCCGCAATCG CCCGCTGGGG TGCACCATTC GAAGTGCTCA CCGACAACGG CAAACAGTTC
ACCGGCAAGT TCACCAGGCC ATTACCGGCC GAGGTCCTCT TCGAACGGAT CTGCCGCGAC
AACGGCATCA CCGCCCGATT GACCAAACGA CGCTCACCAA CGACCACCGG CAAGGTCGAA
CGCTTCCACA AGACGTTGCG ACGCGAACTC CTCGACGAGA CAGGCGCATT CGAGTCGATT
GAGGCCGCGC AGGCAGCCAT CGACGAATGG GTTCACGCTT ACAACACTGT GCGGCCCCAT
CAATCGCTGG ACATGGCTAC GCCGGCGAGC TTGTTCCGCA GTCGAGTCAC CGATCCGGAA
CTACACCCGC CCGACTTAGG TCATCGTCGG CAGATTTTTG GAGTTCTGAT TCGCTGA
|
|---|
| Protein sequence | MVNPEVPESD SDVAARVTVE IRLRAVTEVN DGAPVGEVAE RYGVTRQTVT AWRKRYEAGG
LEALADQSRR PHSSPGRISP DVEALICEMR RHHRRWGARR IAYELKLEIG KQAPSRSTTH
RVLVRNGLVN SQEQQHKRVY KRWAREAPMH LWQLDIVGGV FLVNGREHKM LTAIDDHSRF
VVAAAVLPVP SGPAVCDAFL AAIARWGAPF EVLTDNGKQF TGKFTRPLPA EVLFERICRD
NGITARLTKR RSPTTTGKVE RFHKTLRREL LDETGAFESI EAAQAAIDEW VHAYNTVRPH
QSLDMATPAS LFRSRVTDPE LHPPDLGHRR QIFGVLIR
|
|---|
| |