Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0456 |
Symbol | |
ID | 4648252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 496944 |
End bp | 498887 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639803965 |
Product | phage integrase family protein |
Protein accession | YP_951310 |
Protein GI | 120401481 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGG TGTTAGTCGG CCAACCCGTA GGCGCCGACG AGGTGGTGGC CGATTATCTC GACCACGTCG CCACCCTGGG TTTGAGCGGG CGGGCGGTAC GTGACCGGAT TCGGATCGCT CGCGACTTCA CCGCACGCCA CCGCGACCTG CACGCCTGGA TGACGCTGCC GGCAGCCGAG CGGATCGCCG AGATACGGGA CACCGGGGCG TGGCCGCTGA TCTGTCACAC GATCGGCACC GGCCGGTTAC GGCTGGACGT CGAGCTGGCC GCGGTCAAAC AGTTAACCGG ACTGGGCCGC GCAGTGGAGG ACCGGGATCC GAGCGGATTC GCCACGTTAC GGAATGCGGG AATTCGGTTG GGCTGGAGAA GTTCCTGGGT CGAGACGGTC CTCGGCGAAT GTCTGGCGGT AGTGCTGGCA CACCACGGCG GAATGGTCGC CGACCTGACC GGCGACGCGC TCGACGACTT CGACGCCACG CTGTCACGTA CCGCGGTGCC GCCATCGTCG CGGCGGGCAT ACCGGGCGCG GCTGGCCAGC CTACGGCAGC TGTTGTTCGA GACCGCGGTC ATCGACACCG CGCCGAAACG CCGACGGTGG GCCCGTAGCC ACGAGCAGCG CTTCACCGAG GTGGAGATGC CCGACCCGAT CCGTCAGACG TTGCTGCGCT ACATCGGCGT GCGCGCGGCG GTGCTGCGGC CCAAATCCGT CGAGTCGCTG ATCAACGACC TGCTGCCCTT CGCCGAATAT CTCACCGCTC ACCATCCCGA CCTCACCAGC CTGCGTGGAC TCGACCGGAG CTGCATCGAG GGCTACCTGA AATGGAATCG CACCCGGGGC TGGCGTGGTC AGCGCGCCGC CGCGGGCGCC GGGCGCACCG TCTCGGCCGC GGTGGCCCAG TCGGCAGTGC TCAGTCTGCG TAACCTGCTC GACGACATCA CCGCCTGGGG CTGGGCGCAG GCCCCGCCAC GGCGGTTGGT ATTCGCCGCC GACGTCCCCA AGCTCGACCA GCCGTTGCCA CGCGCGCTAG CACCCGATGT GGACGCGGCA GTGATGAACG CCGTTGCTCA CCTGCAGGAT CCGTTCGCCC GCATCGGCCT GACCGTGCTG CGTGGTGCCG GCCTGCGGGC GGGGGAACTG CTCGACCTCG AACTGGGCAG CATCATCGAC TACGGGCCGG CCGGAACCTG GCTGAAGGTG CCACTGGGCA AGCTCGCCAC CGAACGCATG GTCCCGCTCT CCGCCGCGAC CCTCGCCGCG CTCGACGAGT GGGTCGCCCT CCGCGGCACG CACCGGCCGC TGCCGCACCC ACGCACCGGC GTGCTCACCG ACTTTCTGTT CACCCGGCAC GGACGCCGCC TGGGCTACAC CCGGCTGCGC AACGGGCTGC TCACCGCCGC TGAATCCGCC GGGTTGCACC GTCCCGACGG CGGCGTCCTG ATGGTCACTC CACATCAGTT GCGCCACACC TGGGCCACCG AACTCGCCAA CGCCGGGATG AGTCTGCAGG CCTTGATGTC CTTACTCGGG CACGTCACTC CACAAATGAC GATCCGCTAC GCCACCCTGG CCTCGCCCAC CCTGCGCGCC GCCTACGACG AAGCGATGGG CAAGATGCGC CGCCAGTTCA CCCTCACCCC GGTCGGCAAA CCGATCCTGC CCGACAAGGT CGGCTGGCTG CACAGTGAAA TGCTGAAAAC CCGCGTCGCA CACGGATACT GCGCTCGCCA CGAATCCGCG GGCGCGTGCC CGTATGCCAA TATCTGCGAA ACCTGCGACA ACTACATCAC CGCCCCCGAA TTCCGCGACA CGCTCACCAA CCAACTCGCC GACGTCCAGG ACCTTAGAAC CGACGCCGAG TGCCGCGGCT GGACCGACGA AGCAGCCCGC CACGACCGCG TCGCCCACGC CCTTACCGAC CACCTCCACC GCCTCGATCA TTGA
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Protein sequence | MTTVLVGQPV GADEVVADYL DHVATLGLSG RAVRDRIRIA RDFTARHRDL HAWMTLPAAE RIAEIRDTGA WPLICHTIGT GRLRLDVELA AVKQLTGLGR AVEDRDPSGF ATLRNAGIRL GWRSSWVETV LGECLAVVLA HHGGMVADLT GDALDDFDAT LSRTAVPPSS RRAYRARLAS LRQLLFETAV IDTAPKRRRW ARSHEQRFTE VEMPDPIRQT LLRYIGVRAA VLRPKSVESL INDLLPFAEY LTAHHPDLTS LRGLDRSCIE GYLKWNRTRG WRGQRAAAGA GRTVSAAVAQ SAVLSLRNLL DDITAWGWAQ APPRRLVFAA DVPKLDQPLP RALAPDVDAA VMNAVAHLQD PFARIGLTVL RGAGLRAGEL LDLELGSIID YGPAGTWLKV PLGKLATERM VPLSAATLAA LDEWVALRGT HRPLPHPRTG VLTDFLFTRH GRRLGYTRLR NGLLTAAESA GLHRPDGGVL MVTPHQLRHT WATELANAGM SLQALMSLLG HVTPQMTIRY ATLASPTLRA AYDEAMGKMR RQFTLTPVGK PILPDKVGWL HSEMLKTRVA HGYCARHESA GACPYANICE TCDNYITAPE FRDTLTNQLA DVQDLRTDAE CRGWTDEAAR HDRVAHALTD HLHRLDH
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