Gene Mvan_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0436 
Symbol 
ID4647811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp473695 
End bp474657 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content64% 
IMG OID639803944 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_951290 
Protein GI120401461 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.236765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGT TCATCGCCAG GCGGCTGCTG GGCATGGTCG CGGTGCTGTT CGCGATCTCG 
GTCATCGTGT TCCTGATCTT CAACGTGGTC CCGAACTCGG ATCCGGCGGC GCGCATCGCC
GGCAAGAACG CCGACCCGGA CCTGATCGCC CGGGTCAACG CCGACCTCGG CCTCGACCAG
CCACTGCCGG TCCAGTACGT GACGATGATG AAGCAGATCT TCACCGGCCA GCTGACCTCG
TATGCCAGCA ACCGCAATGT GGTGGAACAG ATCTGGGAGG GTCTACCCGC CACCTTCTCG
TTGTGTATCG GCGCGGCGGT GATCTGGATG TCGCTGGCGG TGCTGTTCGG TTACCTGAGC
GCGGTGCATG CGGGCCGGTT CGCCGACCGC GCGCTGACGG TGCTGTCGCT GGTCGGGATC
TCGATGCCGG TGTTCTGGCT GGCCGCGATC CTGCTCTATT TCCTGAGCTT CAAGGTGCAG
CTGTTTCCGA CCGGCAGCTA TGTGGACCTC ACCGAGGATC CGCTGGACTG GGCGTATCAC
CTTGTGCTGC CGTGGTTCAC GCTGGCGGTG CTGTTCATCG GTTTCTACAG CCGGGTGCTG
CGGTCCAACA TGCTGGACGC GATGAACGAG GACTACGTGC GCACCGCAAG GGCCAAGGGC
CTCAGTGAAC GTCAGGTGCG GATCCGGCAT GTGTTGCGCA ACTCGATGAT TCCGATCGTC
ACGCTGTTCG GCCTGGATTT CGGGATGGTC GTCGGCGGTG GAGCGATCCT CACCGAAACG
GTCTACAACC TGCCCGGTGT CGGGCTGTAC GCCGGTGAGG CGATCCGCAG CCTCGACCTT
CCGCCGCTGA TGGCGGTCAC CATGTTCGGG GCGTTCTTCA TCGTGTTGTT CAACACCGTG
GTCGACGTCG CCTACGCGGT GTTGGATCCC CGGATCCGGC TGGGAGAGGC GGCGCCGGCA
TGA
 
Protein sequence
MARFIARRLL GMVAVLFAIS VIVFLIFNVV PNSDPAARIA GKNADPDLIA RVNADLGLDQ 
PLPVQYVTMM KQIFTGQLTS YASNRNVVEQ IWEGLPATFS LCIGAAVIWM SLAVLFGYLS
AVHAGRFADR ALTVLSLVGI SMPVFWLAAI LLYFLSFKVQ LFPTGSYVDL TEDPLDWAYH
LVLPWFTLAV LFIGFYSRVL RSNMLDAMNE DYVRTARAKG LSERQVRIRH VLRNSMIPIV
TLFGLDFGMV VGGGAILTET VYNLPGVGLY AGEAIRSLDL PPLMAVTMFG AFFIVLFNTV
VDVAYAVLDP RIRLGEAAPA