Gene Mvan_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0434 
Symbol 
ID4647809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp471723 
End bp472709 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content69% 
IMG OID639803942 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_951288 
Protein GI120401459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.84761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.118426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCC CGCTGCTCGA GGTGAGTGAC CTCGTCAAGC ACTTCCCGAT CAAGTCCGGC 
ATCGTCATCG AGCGCGAGGT GGGCCGCGTC CGCGCGGTCG ACGGCGTCAG CCTGACCCTC
GGCGAAGGCG AGACCCTGGG CCTGGTCGGC GAATCCGGGT GCGGCAAGTC GACGCTGTGC
CGGGCCATCC TACAGCTGAC GCCACCGACC TCGGGGTCGG TGAAGTTCAT GGGCCAGGAA
CTGGTCGGCA TGTCCGGACG CGAGTTGCGC CCGCTGCGCC GCCAGATGCA GATGATCTTC
CAGGATCCGT TCTCCTCGCT GAACCCGCGC AAACGCATCG GACAGATCAT CGGCGACCCG
ATGGACCTGC ACGAGTTGGC GAGCGGCGCG GACCTGAAAC GGCGGGTGCA GGATCTGCTG
GACCGGGTCG GCCTGCGCCC CGAGCACTAC AACCGCTATC CGCACGAGTT CTCCGGTGGG
CAGCGGCAAC GCATCGGAAT CGCCCGGGCT CTCGCGCTGC GGCCGAAGCT GATCGTGGCC
GACGAGCCGG TGTCGGCGCT CGACGTGTCG GTGCAGGCGC AGATCGTCAA CCTGCTCAAG
GACCTGCAGG ACGAGTTCGG GTTGTCCTAT CTGTTCGTCG CGCACGACCT CGGGGTGGTG
CGGCATGTGT CCGACCGCGT CGCGGTGATG TACCTGGGCA AGGTCGTCGA GGACTCCGGA
ACCGACGACC TGTACGACCG GCCCATCCAC CCGTACTCGA ATGCGCTGCT GTCGGCGGTG
CCCATCCCCG ATCCCCGGCG CAACGAGGCC CGAGAGAGGG TGGTCCTCGA GGGCGACGTT
CCGAGTCCGA GCAACCCCCC TGCGGGGTGC CGGTTCCACA CCCGCTGCCC CTGGGCCTCC
GAGGTGTGCG CCTCCGACGA GCCGGCGATG AGCGACTACG GCCCGGGGCA CGCGGCGGCC
TGCCACCATC CGCGCAACAC GGCCTGA
 
Protein sequence
MTAPLLEVSD LVKHFPIKSG IVIEREVGRV RAVDGVSLTL GEGETLGLVG ESGCGKSTLC 
RAILQLTPPT SGSVKFMGQE LVGMSGRELR PLRRQMQMIF QDPFSSLNPR KRIGQIIGDP
MDLHELASGA DLKRRVQDLL DRVGLRPEHY NRYPHEFSGG QRQRIGIARA LALRPKLIVA
DEPVSALDVS VQAQIVNLLK DLQDEFGLSY LFVAHDLGVV RHVSDRVAVM YLGKVVEDSG
TDDLYDRPIH PYSNALLSAV PIPDPRRNEA RERVVLEGDV PSPSNPPAGC RFHTRCPWAS
EVCASDEPAM SDYGPGHAAA CHHPRNTA