| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0398 |
|---|
| Symbol | |
|---|
| ID | 4645876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 430878 |
|---|
| End bp | 431657 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639803906 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_951252 |
|---|
| Protein GI | 120401423 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.882339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATCG ATCTGACAGG TAAGACCGCT CTCGTCACCG GCTCGACCCA GGGAATCGGT
CTCGCGATCG CCCGGTCGCT GGCCGCCTCC GGAGCGCGCG TCGCAGTGAA CGGACGCAGC
CGGGACCGGG TCGACGAGGC CGTGGCGACA CTCGACGGCG ATGTCGTCGG CGTCGCGGCC
GACGTCGCCG ACGCGGCAGG CGCGCAGGCC TTGGCCGCGG AACTCCCGCA CATCGACATC
CTGGTCAACA ACCTCGGCAT CTTCGGCGCG GTGCCGGCGC GCGAGATCAC CGACGACCAG
TGGCGCAGCT ATTTCGAGGT CAACGTGCTC GCCGCCGCGC GGCTCATCCG GCACTATCTG
CCCGGCATGG TGGATCGCGG GTGGGGCCGG GTGCTGCAGA TCGCCAGCGA TTCGGCGATC
GTCATCCCGG AGGAGATGAT CCATTACGGG GTGTCCAAGA CCGCGCTGCT GGCCCTGTCG
CGGGGTTTCG CCAAGGACGC GTCGGGCACC GGCGTCACCG TCAACTCCGT CATCGCCGGA
CCCACCCACA CCGCAGGGGT GGAGGACTTC GTCTACCAGC TGGTCGACAA ATCGCTGCCC
TGGGAGCAGG CGCAGCGCGA GTTCATGCGG TTACACCGGC CGCAGTCGCT GATCGAGCGC
CTCATCGAGC CCGAGGAGAT CGCCAACATG GTCACCTACC TGGCGTCGCC ACTGGCGTCG
GCGACGACCG GTGGCGCACT GCGCGTCGAC GGCGGCTACG TCGACGCGAT CCTGCCCTGA
|
|---|
| Protein sequence | MKIDLTGKTA LVTGSTQGIG LAIARSLAAS GARVAVNGRS RDRVDEAVAT LDGDVVGVAA
DVADAAGAQA LAAELPHIDI LVNNLGIFGA VPAREITDDQ WRSYFEVNVL AAARLIRHYL
PGMVDRGWGR VLQIASDSAI VIPEEMIHYG VSKTALLALS RGFAKDASGT GVTVNSVIAG
PTHTAGVEDF VYQLVDKSLP WEQAQREFMR LHRPQSLIER LIEPEEIANM VTYLASPLAS
ATTGGALRVD GGYVDAILP
|
|---|
| |