| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0396 |
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| Symbol | |
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| ID | 4645874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 427789 |
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| End bp | 429027 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639803904 |
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| Product | hypothetical protein |
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| Protein accession | YP_951250 |
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| Protein GI | 120401421 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00684947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.451981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTC GCGAGTCGTT CGAGATCGCC GGCGAGCAGG TGCCGATCAC CAATCCGGAC
AAGGTGGTGT TCGGCGATCT CGGGCTCACC AAGCTCGACC TGATGCGCTA CTACGCCGCC
GTCGCCGACG GGGCGCTGCG CGGCGTCCGG GATCGTCCGA TGATCCTGAA GCGGTTCGTC
AAGGGCATCG AGCAGGAGGC CGTCTTTCAG AAGCGGGCCC CGGAGAAGCG GCCGGACTTC
GTCGACGTCG CCGAGTTGAA GTACGCGTCG GGCACGTCGG CCAAGGAGGC GGTGCTGCAC
GACGCCGCCG GCCTGATCTG GGCGGTGAAC CTCGGCTGCG TCGACCTGAA CCCGCACCCG
GTGCGCGCCG ACGACCTCGA GCACCCCGAC GAATTGCGGG TCGACCTCGA CCCGATGCCC
GGGGTGGGCT GGCGCCAGAT CCTCGACGTG GCGTTCGTGG CGCGGGAGGT GCTGGAGGAC
CACGGCCTGG TGGCCTGGCC GAAGACGTCC GGCTCGCGTG GCTTCCACAT CTATGCGCGC
ATCCACCGCC GCTGGCCGTT CAAGCTCGTC CGGCTGGCGG CCGAGACCGT TGCCCGCGAG
GTCGAACGCC GGGCCCCGGA GTCGGCGACG GCGCGGTGGT GGAAGGAGGA ACGCCAGGGT
GTGTTCGTCG ACTTCAACCA GAACGCCAAG GACCGCACCG TGGCGTCGGC GTACTCCGTG
CGGGCCACCC CGGATGCGCG GGTGTCGACG CCGCTGTTCT GGGACGAAGT CGCCGACTGC
CGCCCCGAGG AGTTCACGGT GCGCACCGTG CCGCGCCGGT TCTCCGAGCG CGGCGATCCC
TGGGAGGGAA TGGACGATGC CGCGGGCGGC CTGGAGGCCT TGCTCGACCT CGCCGACCGG
CTCGGGCCGG CCGAGAAGGC GCCCAGGGGT GCCCGCAAGT CAGCCGACGG CCGCAGGGTT
TCGGTCATGC CGTTGATCGA GATCGCCCGG ACCAAGACCA AAGACGAGGC CATGGCGGCG
CTGCAGCAGT GGCGCGACAA GTATCCGGCT GCAGCCGAAA AGCTGGAGCC CGCAGACGTT
CTCGTCGACG GCATGCGCGG CCCCAGCTCG ATCTGGTACC GGATCCGGAT CAACCTGCAA
CACGTCGCCG AGGACGCGCG GCCCGCACAG GAGGAGCTGC TGGCGGACTA CAATCCGTGG
CACAACTACA CCGGCGCGCA GCAACAGCGC CGCGACTAA
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| Protein sequence | MAARESFEIA GEQVPITNPD KVVFGDLGLT KLDLMRYYAA VADGALRGVR DRPMILKRFV
KGIEQEAVFQ KRAPEKRPDF VDVAELKYAS GTSAKEAVLH DAAGLIWAVN LGCVDLNPHP
VRADDLEHPD ELRVDLDPMP GVGWRQILDV AFVAREVLED HGLVAWPKTS GSRGFHIYAR
IHRRWPFKLV RLAAETVARE VERRAPESAT ARWWKEERQG VFVDFNQNAK DRTVASAYSV
RATPDARVST PLFWDEVADC RPEEFTVRTV PRRFSERGDP WEGMDDAAGG LEALLDLADR
LGPAEKAPRG ARKSADGRRV SVMPLIEIAR TKTKDEAMAA LQQWRDKYPA AAEKLEPADV
LVDGMRGPSS IWYRIRINLQ HVAEDARPAQ EELLADYNPW HNYTGAQQQR RD
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