| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0325 |
|---|
| Symbol | |
|---|
| ID | 4645627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 357642 |
|---|
| End bp | 358457 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639803833 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_951179 |
|---|
| Protein GI | 120401350 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA CTGCGGCAAC ACTTTCCGGG CGCACCGCAC TGGTCACCGG TTCGACCTCC
GGACTCGGCG CCGGCATCGC CGAGGCTCTC GCCGACGCGG GCGCCCACGT GGTCATCACC
GGGCGCACGC GAGCACGCGG TGAACAGGTC GTCACGCAGA TCGAATCCCA GGGCGGCCGC
GCGGTGTTCG TTCCCGTCGA CTTCGCGGCA GGACCCGGCA CCATCACCGA TCTCGTGGTG
ACGGCGACCG AGGCCCTCGG TGGCCGGCTC GACATCCTGG TCAACAACGT CGCCACCCTC
GTGCAACCGG CACCCACCGC TGACGTCACC GCCGAGGAGA TCACCACTGC ATTCGGCGTC
AGCGTCGCCA CACCGTTCCT GCTCACCGGG CTCATAGCCC CGGCAATGGT GCAGCGTGGC
GATGGCGCGA TCGTCAACAT CGGCTCGATC AGCGGCATCA TCGGCGCCGC AGGCTCGGCG
CTTTACGGGG CCACCAAGGC GAGCGTGCAC TTGCTGACGA AGGCCTGGGC CGCCGAATAC
GGACCCTCCG GCGTCCGGGT CAATGCCGTG GCCCCCGGTC CCATCGCCAC CGAACGCACC
CGAGAGTTCG GCGACGCCAT CGCACCGGTC CTGGCTCGCG TGCCGTCGCA CCGGATGAGC
ACCGTCGCCG AAGTAGCCTC CGCCGTGGTG TTTCTCGCCG GGCCCGAGGC CGCCAACATC
CACGGCACGA TCCTGAGCGT CGACGGCGGC GCGACAGCGG TCCGAGACGA GCCGGCCGCC
GTCACCAAGC TTGGCAACCA CCCACACCCC GGATAG
|
|---|
| Protein sequence | MNTTAATLSG RTALVTGSTS GLGAGIAEAL ADAGAHVVIT GRTRARGEQV VTQIESQGGR
AVFVPVDFAA GPGTITDLVV TATEALGGRL DILVNNVATL VQPAPTADVT AEEITTAFGV
SVATPFLLTG LIAPAMVQRG DGAIVNIGSI SGIIGAAGSA LYGATKASVH LLTKAWAAEY
GPSGVRVNAV APGPIATERT REFGDAIAPV LARVPSHRMS TVAEVASAVV FLAGPEAANI
HGTILSVDGG ATAVRDEPAA VTKLGNHPHP G
|
|---|
| |