Gene Mvan_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0323 
Symbol 
ID4645625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp355357 
End bp356040 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID639803831 
ProductTetR family transcriptional regulator 
Protein accessionYP_951177 
Protein GI120401348 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.939407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.953553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACA GTCAGTCAGT GCCAGTCCCT GACGACGACG TGGACCCTCG GCGCATCCGG 
TCCCGCACCC GGCTGCTGGA TGCTGCTGCA ACGCTTCTGA GCACCGGTGG GGTGGAAGCA
GTCACCATTG ATGCGGTCAC CAAAGCATCC AAAGTGGCCC GAACCACGCT GTACCGCCAC
TTCCACAGTT CGTCGCATCT GCTCGCAGCC ACGTTCGAAC GCCTACTCCC ACAAGTGACC
ACTCCGGCAC CGACCAGCGG ACCCCTCCGT GAGCAGCTGA TCGAATTGCT CAGCCGCCAA
GCCGCACTCT TCAACGACGC ACCGCTGCAT GTCACGACAC TCGCGTGGCT CTCATTGGGG
CCCACCGGCT CCAATAACGA AGCTGATGAC CGCCACACAT CGGGGGCGCT GCGGGCCCGA
GTCGTTGACC AGTACCGTCA ACCATTTGAC GCCATACTCA CCAGCCCAAA AGCACAAGCC
GAACTTGACG ACTTCGACCG GGAACTGGCG CTCTGCCAAC TCGTCGGACC ACTCGCCTTC
GCCCGAATGA CTGGGATTCG CACCATCACT CACAATGACT GCGCGAACAT CGTCGATGAC
TTTCTCACCG CCCACCGCAA GACCGATAGC GACGCCAAAG AGTCGAAGAT AGCAACCAGC
AGACGGGCCG CCCCGCGCGT CTAG
 
Protein sequence
MSDSQSVPVP DDDVDPRRIR SRTRLLDAAA TLLSTGGVEA VTIDAVTKAS KVARTTLYRH 
FHSSSHLLAA TFERLLPQVT TPAPTSGPLR EQLIELLSRQ AALFNDAPLH VTTLAWLSLG
PTGSNNEADD RHTSGALRAR VVDQYRQPFD AILTSPKAQA ELDDFDRELA LCQLVGPLAF
ARMTGIRTIT HNDCANIVDD FLTAHRKTDS DAKESKIATS RRAAPRV