Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0306 |
Symbol | |
ID | 4643373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 339596 |
End bp | 340558 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639803815 |
Product | integrase catalytic subunit |
Protein accession | YP_951161 |
Protein GI | 120401332 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0314438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGT TGTCGCGCTC GACGTGGCAC TACCGATCAC ACCCGCGCCC GCGCGTGGCC AACCCGATGC CGCACAAGGA TCGGGCCTAC CCGTCGCGCA TCGGTGTGGC CGACCGCGCG GTAATCGCCG AACAGATCAT CGCCGGCTGG CTGGCGGGGG TGTCGGTGGA CCAGTCCTTC GCCACGATGT GGGATGCCGG TGTGCTGTTG GCCTCGCGGC GGTCGTGGTG GCGCATCGCG GCGGTCATCG ACCAGAGCCT GCGTCCGGTC GCGCCGACCC GCGCGACGAA CAAGACGCCC CGGTCGGCGC CGGTGCTCAA AGCCACTGGT CCGCAACAGA TCTGGAGTTG GGATATCACC GACCTGCACA GTCCGTGGCG CGGTGTGTCG TTCAAGACGT ACTCGATCGT CGACATTTTC TCCCGCAAGA TCGTGGGCTG GCGTGTGGAG GAACGCGAGT GCGACGACCT GGCTGTGGAG ATGTTCAAGA CTGCGATCGC CGAACACGGA CCACCAGCGG TCGTGCACGC CGATTCCGGA CCGGCGATGC GTTCCACCGT GCTCAAGGAC CTGCTCGCCG GCCTCGGCAT CGGCCAGACA CACATCCGGC CACACGTCAG CAATGACAAC CCGTTCTCCG AATCGGAGTT TCGGACCATG AAGTACCGGC CGAACTACCC CGGGGTGTTC GACGATCTCA ACACCGCTCA CGCCTGGGTG CAGGCCTACG TGCGCTGGTA CAACCAGCAC CACCGCCACA GCGGCATCGC GTTATTCACC CCCGACGAGG TCCACAACGG ATCGTGGACA CGACAGTGGA TGCACCGCGA CCACATCCTG CAGGCCTACT ACCACGCCCA CCCCGAACGA TTCCGAGCAC GCCCGCACAC CAAATCACCC GCGGCCATCG TCGGCATCAA CCTGCCCACC GAAAAAGACC CCAACCGACT CCACGCAGCT TGA
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Protein sequence | MIELSRSTWH YRSHPRPRVA NPMPHKDRAY PSRIGVADRA VIAEQIIAGW LAGVSVDQSF ATMWDAGVLL ASRRSWWRIA AVIDQSLRPV APTRATNKTP RSAPVLKATG PQQIWSWDIT DLHSPWRGVS FKTYSIVDIF SRKIVGWRVE ERECDDLAVE MFKTAIAEHG PPAVVHADSG PAMRSTVLKD LLAGLGIGQT HIRPHVSNDN PFSESEFRTM KYRPNYPGVF DDLNTAHAWV QAYVRWYNQH HRHSGIALFT PDEVHNGSWT RQWMHRDHIL QAYYHAHPER FRARPHTKSP AAIVGINLPT EKDPNRLHAA
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