Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0257 |
Symbol | |
ID | 4647403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 281018 |
End bp | 281647 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639803766 |
Product | TetR family transcriptional regulator |
Protein accession | YP_951112 |
Protein GI | 120401283 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.102981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGTG GGACCAAGCG GCTGCCGCGT GCCGTCCGTG AGCAGCAGAT GCTCGACGCC GCGGTCGAGA TCTTCTCGGT GAACGGCTAC CACGAGACGT CGATGGACGC GATCGCCGCC GAGGCGCAGA TCAGCAAGCC GATGCTCTAC CTGTACTACG GGTCCAAAGA GGAGCTGTTC GGCGCCTGCC TGAACCGCGA GCTGGGCCGC TTCGTCGACG AGGTCAACAG CAACATCGAC TTCAGCGCCG CGCCCAAGGA GCTGTTGCGC ACCGCGGTGC TGGCGTTCCT GAAGTACATC GACGCCAACC GGGCGTCGTG GATGGTGCTC TACACCCAGG CGACCAGCTC TCAGGCGTTC GCCCACACCG TGCGCGAAGG GCGCGAGCGC ATCATTGAAC TCGTCGGGCG CCTGCTGCGC TCGGGCACCA AGTTCCCGGA GCCGGACACC GACTTCGAGC TGATGGCGGT CGCACTCGTG GGGGCCGGCG AGGCGATCGC CTCCCGCGTC AGTACCGGCG ACGCCGACGT CGACGAAGCC GCCGAGTTGA TGATCAACTT GTTCTGGCTG GGCCTCAAGG GCGCGCCGTC GGCCGCAGAC GTCGACGCCA CCGCGGTCAT CTCAAGCTAG
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Protein sequence | MAGGTKRLPR AVREQQMLDA AVEIFSVNGY HETSMDAIAA EAQISKPMLY LYYGSKEELF GACLNRELGR FVDEVNSNID FSAAPKELLR TAVLAFLKYI DANRASWMVL YTQATSSQAF AHTVREGRER IIELVGRLLR SGTKFPEPDT DFELMAVALV GAGEAIASRV STGDADVDEA AELMINLFWL GLKGAPSAAD VDATAVISS
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