Gene Mvan_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0220 
Symbol 
ID4647733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp233473 
End bp234195 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID639803729 
Productregulatory protein GntR, HTH 
Protein accessionYP_951075 
Protein GI120401246 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0288237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGG CCTATCAGGT GCTGCGAGAA CGGCTTCGCG ACGACATCGC CGCGGGCCGC 
TATCCCGACG GCACACGGCT GCCGACGGAA TCGGAACTGG TCGCCCGGCA CGGCCTGTCC
CGCCAGACCG TACGACGCGC ATTCCAGGAT CTCGTCGCCG AGGGCACCGT GTACCGGGTG
CCCGGGCGTG GGAGCTACGC GAGCGAGCAG GGCCGTCGCT ACCTCCGGCA GCTGGGGTCC
ATCGAGGACC TGATGAGCCT GTCCGACGAC ACCACGATGG AGGTGGTCGA CGGGCTGCGT
CGACGCGTCG ACATCGAGGC CGCCAGCCGC CTACGGCTGG ACGGGGACGT CGTCTACTCG
GTGCAGTTCC GTCGACTGCA CGGTGGTATC GCGTTCGGGC ACACCACCGT TGCACTCCCG
CCTGCGGTGG CCACCTCCGT GCTCACGTCC CCGCATCTGG TCACCGGCGC CACGAGCACT
CACACCGTGA TCGGGCTGCT CGAGCCGCAT CTGGAGAAAC CGATCGCCGA GGCGGCGCAA
TCGATCACCG TCGCTGCCGC GGACGAGGCG GCCGCCGCGG CGGTGGCCTG CCCGCCCGGA
CATCCGATGC TGCGGGTGGA CCGGCTCTAC GCCGACGACG AGGGCCACCC GGTCGAGTTG
GCCGTCAGCC AGTTCCTGCC CGAGCAATAC ACCTACCGGG TCACGTTGCG CCGCTCCAGT
TAG
 
Protein sequence
MPPAYQVLRE RLRDDIAAGR YPDGTRLPTE SELVARHGLS RQTVRRAFQD LVAEGTVYRV 
PGRGSYASEQ GRRYLRQLGS IEDLMSLSDD TTMEVVDGLR RRVDIEAASR LRLDGDVVYS
VQFRRLHGGI AFGHTTVALP PAVATSVLTS PHLVTGATST HTVIGLLEPH LEKPIAEAAQ
SITVAAADEA AAAAVACPPG HPMLRVDRLY ADDEGHPVEL AVSQFLPEQY TYRVTLRRSS