Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0220 |
Symbol | |
ID | 4647733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 233473 |
End bp | 234195 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639803729 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_951075 |
Protein GI | 120401246 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0288237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCCGG CCTATCAGGT GCTGCGAGAA CGGCTTCGCG ACGACATCGC CGCGGGCCGC TATCCCGACG GCACACGGCT GCCGACGGAA TCGGAACTGG TCGCCCGGCA CGGCCTGTCC CGCCAGACCG TACGACGCGC ATTCCAGGAT CTCGTCGCCG AGGGCACCGT GTACCGGGTG CCCGGGCGTG GGAGCTACGC GAGCGAGCAG GGCCGTCGCT ACCTCCGGCA GCTGGGGTCC ATCGAGGACC TGATGAGCCT GTCCGACGAC ACCACGATGG AGGTGGTCGA CGGGCTGCGT CGACGCGTCG ACATCGAGGC CGCCAGCCGC CTACGGCTGG ACGGGGACGT CGTCTACTCG GTGCAGTTCC GTCGACTGCA CGGTGGTATC GCGTTCGGGC ACACCACCGT TGCACTCCCG CCTGCGGTGG CCACCTCCGT GCTCACGTCC CCGCATCTGG TCACCGGCGC CACGAGCACT CACACCGTGA TCGGGCTGCT CGAGCCGCAT CTGGAGAAAC CGATCGCCGA GGCGGCGCAA TCGATCACCG TCGCTGCCGC GGACGAGGCG GCCGCCGCGG CGGTGGCCTG CCCGCCCGGA CATCCGATGC TGCGGGTGGA CCGGCTCTAC GCCGACGACG AGGGCCACCC GGTCGAGTTG GCCGTCAGCC AGTTCCTGCC CGAGCAATAC ACCTACCGGG TCACGTTGCG CCGCTCCAGT TAG
|
Protein sequence | MPPAYQVLRE RLRDDIAAGR YPDGTRLPTE SELVARHGLS RQTVRRAFQD LVAEGTVYRV PGRGSYASEQ GRRYLRQLGS IEDLMSLSDD TTMEVVDGLR RRVDIEAASR LRLDGDVVYS VQFRRLHGGI AFGHTTVALP PAVATSVLTS PHLVTGATST HTVIGLLEPH LEKPIAEAAQ SITVAAADEA AAAAVACPPG HPMLRVDRLY ADDEGHPVEL AVSQFLPEQY TYRVTLRRSS
|
| |