Gene Mvan_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0194 
Symbol 
ID4647832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp200997 
End bp202175 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content71% 
IMG OID639803704 
Producthypothetical protein 
Protein accessionYP_951050 
Protein GI120401221 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.327389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCACG ACGCGCCCGC GAGCGACGCG CCGGCCGGCC CCGCCGGCCC CGACCGGAGC 
CGCGGCAAGT ACTGGTGGCT GCGCTGGGCG CTCATCGCGC TCGCCGTCAT CGTGCTGACC
GTCGAGCTGG CGCTGGTGCG CGACCAGCTG GCCAAGGCGT GGAAGAGCCT GGTGTCGGCC
GACTGGTTGT GGGTGCTCGC GGCCGCCGCC GCGGCGATGG CGTCGATGCA CAGCTTCGCC
CAGATCCAAC GCACGCTGTT GCGGTCGGCC GGGGTGCGGG TGCATCAGTG GCGCTCGGAG
GCGGCGTTCT ACGCGGGCAA CGCGTTGTCC ACCACGCTGC CCGGTGGTCC GGTGTTGTCG
GCGACGTTCA TCTTCCGGCA GCAGCGGCTC TGGGGCGCGT CGCCGCTGGT GGCGTCGTGG
CAGCTGGTGA TGTCGGGGGC ATTGCAGGTC ATCGGCCTCG CACTGCTCGG CCTCGGCGGG
GCGTTCCTGC TCGGCGCCAG GGAGAACCCA CTGTCGCTGA TCTTCTCGCT CGGCGGTTTC
GTGGCGTTGA TCCTGCTGGC CCAAGCGGTG GCGACCCGCC CGGAACTGCT CGACGGTATC
GGTGCCCGGG TGCTGAGATG GATCAACTCG GTGCGCGGCA AGCCCACCCG CGCCGGGCTG
GCCAAGTGGC GCGAGATCCT GACCCAGCTG GAGTCGGTGC AGCTCAGCCG CCGCGACCTC
GGGGAGGCGT TCAGCTGGTC GCTGTTCAAC TGGATCGCCG ACGTCGCATG TCTGCTGTTC
GCCTGCTTCG CCACCGGCGG GCATCCGTCG CTCGCCGGTG TGACGGTCGC CTACGCCGCC
GCCCGCGCGG TCGGGTCGAT CCCGCTGATG CCCGGCGGGC TGTTGGTGGT CGAGGCTGTT
CTGGTGCCCG GCCTGGTGTC GAGCGGGATG TCGCTGGCGT CGGCGATCTC GGCGATGCTG
ATCTACCGGC TGATCAGCTG GATCTTCATC TCCGCGATCG GCTGGGTGGT GTTCTTCTTC
ATGTTCCGCA CGGCACACGA CGTCGAACCC GACCCTGCCG CGGCGCCGAC GGCCACCCCC
GCCGAGGATG TGGCCCCGCA GCTGTTCAGC CCGGACCCGG ACGCCTTCCA CCCGCCGGAC
CAGAAATCCG GTGCGCCACC GGAGGACCCG GATCGCTAG
 
Protein sequence
MSHDAPASDA PAGPAGPDRS RGKYWWLRWA LIALAVIVLT VELALVRDQL AKAWKSLVSA 
DWLWVLAAAA AAMASMHSFA QIQRTLLRSA GVRVHQWRSE AAFYAGNALS TTLPGGPVLS
ATFIFRQQRL WGASPLVASW QLVMSGALQV IGLALLGLGG AFLLGARENP LSLIFSLGGF
VALILLAQAV ATRPELLDGI GARVLRWINS VRGKPTRAGL AKWREILTQL ESVQLSRRDL
GEAFSWSLFN WIADVACLLF ACFATGGHPS LAGVTVAYAA ARAVGSIPLM PGGLLVVEAV
LVPGLVSSGM SLASAISAML IYRLISWIFI SAIGWVVFFF MFRTAHDVEP DPAAAPTATP
AEDVAPQLFS PDPDAFHPPD QKSGAPPEDP DR