Gene Mvan_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0170 
Symbol 
ID4645186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp179603 
End bp180181 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content72% 
IMG OID639803681 
ProductTetR family transcriptional regulator 
Protein accessionYP_951027 
Protein GI120401198 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.652591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.659974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAG CGTCGTCGGC GCAGATGCCG CCGCAGAGTG CGCGTCAGCG CGTGCTCGAC 
GTGGCGCTGG CGTTGTTCAC GCGTCACGGG TACGCGGGCA CGTCGCTGCA GATGATCGCC
GACGAGATGG GCGTCACCAA GGGCTCGCTC TACTACCATT TCCGCGCCAG GGAGGACCTG
TTGCGCGCGC TGGTCGGGCC GTTGATCGAG CAGCTGCGCG CGATCGTCGA ACACGCCGAA
GCCCAGCGCA GTCCATCAGT ACGGGCCGAA CATGTCCTCA CCGGTTATGC CCGGTTGGCC
GCCGCGAACC GGGCTCTGGT GGCGGTCACC AGCGGCGACC CCAGTGTCGT CGAGGTGATC
CACGCCGATC CGGACTGGGC CGACCTGATC GACCGTCAGA TCGGTCTGCT GGCGGCGGTT
CAGCCCGGGC TGGCCGGCCG GGTGCGGGCC ACGATCGTGA TGGCGGGCAT CGCCGCGACC
GCCGCACCCG GCGTCGTCGA GGCGGACGAG GCGGAGCTGT GCCGGCAGCT GATCGACGCC
GGCCGGCGCA CCCTCGGCCT GCGCGCCCCG CGGGCCTGA
 
Protein sequence
MTTASSAQMP PQSARQRVLD VALALFTRHG YAGTSLQMIA DEMGVTKGSL YYHFRAREDL 
LRALVGPLIE QLRAIVEHAE AQRSPSVRAE HVLTGYARLA AANRALVAVT SGDPSVVEVI
HADPDWADLI DRQIGLLAAV QPGLAGRVRA TIVMAGIAAT AAPGVVEADE AELCRQLIDA
GRRTLGLRAP RA