| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0162 |
|---|
| Symbol | |
|---|
| ID | 4645178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 173613 |
|---|
| End bp | 174218 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639803673 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_951019 |
|---|
| Protein GI | 120401190 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02959] RNA polymerase sigma factor, SigZ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCG ACGAGACCAA GACAAGCCCG GCTGCGGTGC TGGACCAGCC CACCGAGCAG
ATGTGGCGGG AGATGTTGCC GCAGCTGCGG ACATTTGTGC GTCGCCGGAT CGCGGACCCC
GACCGGGCCG ACGATCTCGT TGCCGAGATC CTGCTGCGCA TCCACCAGAA CATCGGGTCG
CTCGATGATC GGGAGCGGCT GCCGAACTGG GTCTTTCGGA TCGCGCGCAA CGCGATCATC
GACGAGTACC GGCGGGCCGG CCGCAGCCGT GAACAGCTGA TGGCGTCACT GCAGGAGGAA
CCCGCGGCGC TCGATGAAGA CGAGCCGGGG GTCGTGCGGG AGCTTTCCGC CTGTTTGCGT
CCGATGCTGG CCGGGCTGCC GCCCGACCAG AAAGCCGCGC TGGAGATGAT CGACCTCGAC
GGGATGACGC AGGCCGATGC CGCCCAGCAA GCGGGCGTAT CGCTGTCCGG GATGAAATCG
CGTGTACAAC GCGGCCGCAG GCGGCTGGCC GAACTACTCA GCCAGTGCTG CACGATGACG
CTTGACGGCC GCGGCGTGCC AATGGATTAC GAGCCGCCGC CGGGCTGCGG GTGCGCTGGG
CGCTGA
|
|---|
| Protein sequence | MSSDETKTSP AAVLDQPTEQ MWREMLPQLR TFVRRRIADP DRADDLVAEI LLRIHQNIGS
LDDRERLPNW VFRIARNAII DEYRRAGRSR EQLMASLQEE PAALDEDEPG VVRELSACLR
PMLAGLPPDQ KAALEMIDLD GMTQADAAQQ AGVSLSGMKS RVQRGRRRLA ELLSQCCTMT
LDGRGVPMDY EPPPGCGCAG R
|
|---|
| |