| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0149 |
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| Symbol | |
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| ID | 4647043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 161503 |
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| End bp | 162525 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639803660 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_951006 |
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| Protein GI | 120401177 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGC CGGTGCGTAA GCTGCATTTT GTGACCGTCA CGGCTCTTGA CGACAGCAGC
GCCGAGGACG CCTTTCTCGC GGATGCACAG AGGTATCGGC GGGAGTTGCT GGCGCACTGC
TACCGGATGA CCGGTTCGCT GCACGATGCG GAAGATCTGG TCCAGGAAAC CTATCTACGC
GCCTGGAAGT CCTTCAAGGG GTTTCAGGGC AAATCCTCGG TGCGGACCTG GCTGTACCGC
ATCGCGACGA ACACCTGCCT GACGGCGCTG GACGGCAACA AGCGCCGGGC GCTGCCGAGC
GGGCTGGGCC AGCCGGCGTC CGACCCTGCC GGTGAGCTGT TCGTGCGTCC GGAGGTGACC
TGGCTGGAGC CGCTGCCCGA CGCCCCGCGC GAGGACCCGT CGGATCCGTC GGTGATCGCC
GAGTCCCGCG AGTCGGTCCG GCTGGCGTTC ATCGCCGCCC TGCAGCATCT CCCGCCGCGG
CAGCGCGCGG TGCTGGTGCT GCGCGAAGTG CTGCAGTGGA AGGCCGCGGA GGTCGGTGAG
GCGGTCGGCA CCTCGACCGC CGCGGTCAAC AGCCTGCTGC AGCGGGCCCG CGCCCAGCTC
GACGAGATCT CACCCAGCCG CGATGACGAG CCGGTCCCAC CGGAGTCGCC CGAGGCTGCG
GAGCTGCTGG ACAAGTACAT CGCCGCGTTC GAGGACTACG ACATGGACCG GCTGGTCGAG
CTGTTCACCG ACGACGCGGT GTGGGAGATG CCACCGTTCG ACGGCTGGTA CCAGGGTCCC
GCCAATATCG TCACGCTGTC GAAGGTGCAG TGCCCGGCAG AGAAAGCCGG CGACATGCGC
TTCCTCAGAA CCACCGCCAA CGGGCAACCT GTGGCCGCGC TCTACATGCG CAACCCGGAA
ACCGGTGTGC ACGAGGCATT TCAGCTGCAC GTGCTCGACG CGGGCAAGGC CGGAATCACA
CACGTGGTGG CGTTCAAGGA GAACGACCTG TTCGCCAGGT TCGGGCTGCC CGACACTCTC
TAA
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| Protein sequence | MSQPVRKLHF VTVTALDDSS AEDAFLADAQ RYRRELLAHC YRMTGSLHDA EDLVQETYLR
AWKSFKGFQG KSSVRTWLYR IATNTCLTAL DGNKRRALPS GLGQPASDPA GELFVRPEVT
WLEPLPDAPR EDPSDPSVIA ESRESVRLAF IAALQHLPPR QRAVLVLREV LQWKAAEVGE
AVGTSTAAVN SLLQRARAQL DEISPSRDDE PVPPESPEAA ELLDKYIAAF EDYDMDRLVE
LFTDDAVWEM PPFDGWYQGP ANIVTLSKVQ CPAEKAGDMR FLRTTANGQP VAALYMRNPE
TGVHEAFQLH VLDAGKAGIT HVVAFKENDL FARFGLPDTL
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