| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0138 |
|---|
| Symbol | |
|---|
| ID | 4647032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 151455 |
|---|
| End bp | 152600 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639803649 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_950995 |
|---|
| Protein GI | 120401166 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGT GGACCAGATT GGCGCGCCGC ACCGTGGCGC TTGCCGCGGC GGCAGTGGTG
CTGACGTCGT GCGGATCGTG GAAGGGCATC TCGAACGTGC CGCTGCCGGG TGGGCCCGGC
AGCGGTTCGG AGCGCACCAC GATCTACGTC CAGATGCCGG ACACGTTGGC GCTGAACGTG
AACAGCCGGG TCAGGGTCGC CGACGTGTAC GTCGGGCGGG TCCGCGCCAT CGAGCTGAAG
AACTGGATCG CGACGCTCAC GCTGGACCTG GAGCCGTCGG TGCAGTTGCC GGTCAACACG
CTGGCCAGGA TCGGCCAGAC CAGCCTGCTC GGTTCGCAGC ATGTCCAGCT GGACCTGCCG
CCGGATCCGT CACCGCAGAA GTTGAAGAGC GGCGATGTGA TCCCGTTGGC GAACGCGTCG
GCCTTCCCGA CCACCGAGCG CGTCCTCGCC AGCATCTCGT CCATCCTGAC CGGTGGCGGC
GTGGCCAACC TCGAGACGAT CCAGACCGAG ATCTACAACG TCCTCAACGG CCGCGCGGAT
CAGATCCGGG AGTTCCTCGG CAGGCTGGAC ACCTTCACCG AAGAATTGAA CCGGCAGCGC
GACGACATCA CCCGCGCCAT CGACTCGACG AACCGGCTGC TGGCGATCGT CGGTCAGCGC
AACCAGACCC TCGATGCGGT GCTGACCGAG TTCCCGCCGC TGATCCAGCA TTTCGCGGAT
ACCAGGGACC TGTTCGCCGA TGCCGTGGAG TCGCTGGGCC GCATCAGCAA CGCCGCCGTG
GATGCGCTCG CACCCGCCAG CGACGACATC AACACCAACC TGGCCAACCT CCAGCGGCCA
CTGCGCGAGC TGGGCAAGTC CGGGCCGTAT CTGCTCGGTG CGCTGAAGAT CTTCCTGACC
GCGCCGTACA ACATCGAGAA CGTGCCGAAG GCGATCCGCG GCGACTACAT CAACGTGTCG
CTGACGGTCG ACCTGACGCT GTCGGCGATC GACAACGGGT TCTTCTCCGG CACAGGCATC
TCGGGCATGC TGCGGGCGCT CGAGCAGGCG TGGGGTCGCG ACCCGGCCAC GATGATCCCG
GATGTGCGCT TCACGCCGAA CCCGAACTCG GTGCCGGGCG GACCTCTCAT CGAGAGGAGT
GAGTGA
|
|---|
| Protein sequence | MGKWTRLARR TVALAAAAVV LTSCGSWKGI SNVPLPGGPG SGSERTTIYV QMPDTLALNV
NSRVRVADVY VGRVRAIELK NWIATLTLDL EPSVQLPVNT LARIGQTSLL GSQHVQLDLP
PDPSPQKLKS GDVIPLANAS AFPTTERVLA SISSILTGGG VANLETIQTE IYNVLNGRAD
QIREFLGRLD TFTEELNRQR DDITRAIDST NRLLAIVGQR NQTLDAVLTE FPPLIQHFAD
TRDLFADAVE SLGRISNAAV DALAPASDDI NTNLANLQRP LRELGKSGPY LLGALKIFLT
APYNIENVPK AIRGDYINVS LTVDLTLSAI DNGFFSGTGI SGMLRALEQA WGRDPATMIP
DVRFTPNPNS VPGGPLIERS E
|
|---|
| |