Gene Mvan_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0134 
Symbol 
ID4647028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp145983 
End bp147209 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID639803645 
Productvirulence factor Mce family protein 
Protein accessionYP_950991 
Protein GI120401162 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCC CCCAAGCAGC ACTGAACACC AGACGGCAGC CGCCGTACAA GCTCGCCGGC 
CTCGTGCTGG CGATCCTCAC CGTCATCGCG GTCACCCTGG TCTACCTGCA GTTCCGCGGT
GACTTCATGG CGCGCACGCA GCTGACGATG ATCTCGGCCA GGTCCGGTCT GTCGATGGAT
CCCGGCGCGA AGGTCACCTA CAACGGTGTG GAGATCGGCC GCGTCGGCAA CGTCGAGGAG
ACCAGCGTCG ACGGTGAGCC GAGGGCCAAG ATCATCCTCG ACGTCAACCC CAAGTACCTG
GACCTGATCC CGAGCAACGT GAATGCCGAC ATCAGCGCCA CCACGGTGTT CGGCAACAAG
TACGTGTCGT TCACCACGCC GGAAGACCCT CGGCCAGAAC GTATTTCAGC TTCAGACGTC
ATCGACGTCA CGTCGGTGAC CACCGAGTTC AACACGCTGT TCGAGACGGT GGTCTCCCTT
GCCGACCAGG TCGACCCGAT CAAGCTCAAC CAGACGCTGA CCGCCACCGC ACAGGCTCTC
GACGGGCTCG GCGACCGGTT CGGTGAGTCG ATCATCAACG GCAACCAGAT CCTGTCCGAG
ATCAATCCGC AGATGCCGCA GATCCGGCGC GACAACCAGT TGCTCGCCGA TCTCGGCGAC
GTCTACGCCG ATGCCGCACC GGATCTGTTC GACGGCCTGC AGAACGCGGT GACCACCGCA
CGCACGCTCA ACGAGCAACA GGGCGACGTC GACCAGGCGC TGATGGCCGC CGTCGGGTTC
GGCAACACCG GTGGTGACGT GTTCGAGCGT GGCGGGCCGT ACCTGGCCCG GGGCGCCGAG
GACCTGGTGC CCACCACGGC GCTGCTCGAC AAGTACAGCC CCTCGTTCTT CTGCATGATC
CGCAACTACC ACGATGTCGA GCCGAAAATC GCGGATGCGC TTGGTGGCAA CGGCTATTCG
CTGAAGACCC ATTCGGAGGT GCTCGGCCTG GGTGCCGGCA ACGCGTACGT CTATCCGGAC
AACCTGCCCC GCGTCAACGC CAAGGGCGGG CCGGGCGGCC GCCCGGGATG CTGGCAGCCC
ATCACCCGGG ACCTGTGGCC GGCACCGTTC CTGGTGCTCG ACACCGGCGC GTCCATCGCC
CCCTACAACC ACATGGAACT CGGGCAGCCG CTGCTCACCG AGTACGTCTG GGGCCGCCAA
GTCGGGGAGC ACACGATCAA CCCATGA
 
Protein sequence
MTVPQAALNT RRQPPYKLAG LVLAILTVIA VTLVYLQFRG DFMARTQLTM ISARSGLSMD 
PGAKVTYNGV EIGRVGNVEE TSVDGEPRAK IILDVNPKYL DLIPSNVNAD ISATTVFGNK
YVSFTTPEDP RPERISASDV IDVTSVTTEF NTLFETVVSL ADQVDPIKLN QTLTATAQAL
DGLGDRFGES IINGNQILSE INPQMPQIRR DNQLLADLGD VYADAAPDLF DGLQNAVTTA
RTLNEQQGDV DQALMAAVGF GNTGGDVFER GGPYLARGAE DLVPTTALLD KYSPSFFCMI
RNYHDVEPKI ADALGGNGYS LKTHSEVLGL GAGNAYVYPD NLPRVNAKGG PGGRPGCWQP
ITRDLWPAPF LVLDTGASIA PYNHMELGQP LLTEYVWGRQ VGEHTINP