Gene Mvan_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0133 
Symbol 
ID4647027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp145108 
End bp145977 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID639803644 
Producthypothetical protein 
Protein accessionYP_950990 
Protein GI120401161 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTACCT CCGCAGTCCT TCGCTCACGC TTCCCCCGCG GGGTGGCGAC CGCCGAGAAG 
TGGGCGGGCG CACCGGCTCG CGGGCTCGAA GCGATGGGCC ACGTCGCGGT GTTCGTCGTC
ACCGCGGTCG GCTCGATCGG GCACGCGCTG CGGTTCTACC GCAGAGAAAT GCTGCGCCTG
ATCGCCGAGA TCGGCATGGG CACCGGCGCG ATGGCCGTCG TCGGCGGCAC CGTCGCGATC
GTCGGCTTCG TCACGCTGTC CGGATCGTCG CTGGTGGCCA TCCAGGGCTT CGCCTCACTG
GGCAACATCG GGGTGGAGGC GTTCACCGGG TTCTTCGCCG CGCTGATCAA CGTGCGCATC
GCCGCCCCCG TGGTCGCGGG CCAGGCGCTG GCGGCCACCG TCGGCGCCGG CGCCACCGCC
GAACTCGGCG CCATGCGCAT CAGCGAGGAG ATCGACGCGC TCGAGGTGAT GGGCATCAAG
TCGATCTCGT ACCTGGTCTC GACGCGCATC ATGGCCGGCT TCGTCGTCAT CATCCCGCTC
TACGCGATGG CGATCATCAT GTCGTTCCTG TCGGCGCAGG TGACCACCAC GGTGTTCTAC
GGCCAGTCCG TCGGCACCTA CGAACACTAC TTCCGCACGT TCCTGCGGCC CGACGACGTG
TTCTGGTCCT TCATCCAGGC CGTGATCATC TCGGTCATCG TGATGCTCAA CCACTGTTAC
TACGGCTTCT ACGCCAGCGG CGGCCCGGTC GGCGTCGGTG AGGCGGTGGG CCGGTCGATG
CGTGCCTCGC TGGTCGCGAT CGTGGTCGTG GTCCTGTTGG CCTCGTTGGC GCTTTACGGT
GTCGACCCGA ACTTCAACCT GACGGTGTAG
 
Protein sequence
MSTSAVLRSR FPRGVATAEK WAGAPARGLE AMGHVAVFVV TAVGSIGHAL RFYRREMLRL 
IAEIGMGTGA MAVVGGTVAI VGFVTLSGSS LVAIQGFASL GNIGVEAFTG FFAALINVRI
AAPVVAGQAL AATVGAGATA ELGAMRISEE IDALEVMGIK SISYLVSTRI MAGFVVIIPL
YAMAIIMSFL SAQVTTTVFY GQSVGTYEHY FRTFLRPDDV FWSFIQAVII SVIVMLNHCY
YGFYASGGPV GVGEAVGRSM RASLVAIVVV VLLASLALYG VDPNFNLTV