Gene Mvan_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0131 
Symbol 
ID4647025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp142383 
End bp144095 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content66% 
IMG OID639803642 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_950988 
Protein GI120401159 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC AAATATCATC CTTCCGCAAC CCGTCGATGG AGCAGAAGAC GTTGACCGAA 
GCGATCCAAC AGCCCGGCTT TGCGACCGAG CAGCCCTACC TGGCGCGCCG GCAGAACTGG
ACCAACCAGC TCGCCCGGCA CGCGCTGATG CAGCCCGACC AGCCGGCGCT GCGATTCCTG
GGCAACACCA CCACCTGGGG TGAGCTGGAC CGGCGGGTCA GCGCCCTGGC AGGCGCGCTG
CACAAGCGCG GCGTCGGTTT CGGCGACCGG GTGCTGATCC TGATGCTCAA CCGGACCGAA
TTCATCGAAG CGGTGCTCGC CACCAACAAG CTGGGCGCCA TCGCGGTGCC GGTGAACTTC
CGCATGACGC CGGCCGAGAT CGCGTTCCTG GTGTCCGACT GCGAGGCCAA GGCCATCATC
ACCGAGGCGG TGCTCGCCAA CGTCGCGACC GCGGTCCGCG ACATCGATCC GACGCTGGCG
ACCGTGATCT CCGCCGGCGG CTCCGGAGAT GACGTTCTCG ACTACGACGA CGTGCTGGCC
GAGAACGCAC CGTGTCCGGT GGTCGACATC CCGAACGACG CGCCCGCTCT GATCATGTAC
ACCTCGGGCA CCACGGGGCG CCCGAAGGGC GCGGTGCTCA CGCACACCAA CCTGACCGGG
CAGGTGATGA CGCTGCTGTT CACCAACGGC GCCGACATCA ACCACGACAT CGGCTTCATC
GGGGTGCCGT TCTTCCACAT CGCCGGTGTC GGCAGCAGCG TCTCCGGGTT GCTGCTCGGC
AGGCCGACGG TGCTCTACCC TGTCGGCGCG TTCGACCCGA ACGAACTGCT CGACGTGCTC
GAGGCCGAGA AGGTGACCGG CATCTTTCTG GTCCCCGCGC AGTGGCAGGC CGTGTGCGCC
GCGCAGAAGG CCAGGCCGCG CGACCTCAAG CTCCGCTTCC TGTCCTGGGG CGCGGCCCCG
GCCTCCGACA CCCTGCTGCG GGAGATGGCG GAGACGTTCC CGGGCGCGCA GATCCTGGCC
GCGTTCGGCC AGACCGAGAT GTCGCCGGTC ACCTGCATGC TGTTGGGCGA CGACGCGATC
CGCAAACTGG GCTCGGTCGG CAAGGTGATC CCGACGGTGT CCGCGCGCAT CGTCGACGAG
GACATGAACG ACGTGCCCGT CGGTCAGGTC GGGGAGATCG TCTACCGCGC CCCGACGCTG
ATGGCGGGGT ATTGGAACAA TCCCAAGGCC ACCGCGGAGG CCTTCGCCGG CGGATGGTTC
CACTCGGGTG ACCTGGTGCG TCAGGACGAA GAGGGTTACA TCTGGGTCGT CGACCGTAAA
AAGGACATGA TCATCTCCGG CGGTGAGAAC ATCTACTGCG CCGAAGTCGA GAACGTCCTC
GCCGCCCACC CCGAGATCGT CGAGGTCGCC GTGATCGGAC GCGCGCACGA GAAATGGGGA
GAGGTTCCCG TTGCTGTGGC GGTGGTGCGG AGTTCGCTGG AAGCAACACC GGGTGCGGGT
ATCGAGCTGG CGGATCTGGA GCAGTTCCTC ACCGAGAGGC TGGCGCGCTA CAAGCACCCG
AAGGCGCTCG AGATCGTCGA TGCGCTGCCC CGAAATCCGG CAGGCAAGGT CCTCAAGACG
GAACTCAGAA TCCGCTACAG CGCCGCGAGT TTTGCTGACG CAGGCGAAAG TTCCACTCCG
CCAACGATTT CAACCGCACC GCAACGGAAT TAG
 
Protein sequence
MFDQISSFRN PSMEQKTLTE AIQQPGFATE QPYLARRQNW TNQLARHALM QPDQPALRFL 
GNTTTWGELD RRVSALAGAL HKRGVGFGDR VLILMLNRTE FIEAVLATNK LGAIAVPVNF
RMTPAEIAFL VSDCEAKAII TEAVLANVAT AVRDIDPTLA TVISAGGSGD DVLDYDDVLA
ENAPCPVVDI PNDAPALIMY TSGTTGRPKG AVLTHTNLTG QVMTLLFTNG ADINHDIGFI
GVPFFHIAGV GSSVSGLLLG RPTVLYPVGA FDPNELLDVL EAEKVTGIFL VPAQWQAVCA
AQKARPRDLK LRFLSWGAAP ASDTLLREMA ETFPGAQILA AFGQTEMSPV TCMLLGDDAI
RKLGSVGKVI PTVSARIVDE DMNDVPVGQV GEIVYRAPTL MAGYWNNPKA TAEAFAGGWF
HSGDLVRQDE EGYIWVVDRK KDMIISGGEN IYCAEVENVL AAHPEIVEVA VIGRAHEKWG
EVPVAVAVVR SSLEATPGAG IELADLEQFL TERLARYKHP KALEIVDALP RNPAGKVLKT
ELRIRYSAAS FADAGESSTP PTISTAPQRN