Gene Mvan_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0039 
Symbol 
ID4644893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp50159 
End bp50842 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID639803550 
Producthypothetical protein 
Protein accessionYP_950896 
Protein GI120401067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.833566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG ATGTTCCGCC GTCCTTGGCG GCAGTGCTCG CGGAACCCGC TGTTCCACAA 
CGCCCGTTCC CCTGGAACCG CTCTGCCTGG GCCACGGGAA TGCACGACCT GCCTGACGTG
CAGCGGGTAC TCGATTCGCT GCCCGACGGA GTCGATCGAA ATCTGGTCCG TGAGGTCGTT
AACTCGCAGC TCAGTGACGG CCAAGTTCTT CCAGCCTTCG TCAGTGCCAT GATCTGGGGT
TACGGCGACA GCGGCTACGG ACCGACTCGA GTCCGCTGGG TACTGACAGG CATCAAGACT
GGCGCCCGCG ACGCGCCGGT GCGGGGTGAT GTCGTCGAAT CGCTCCGTGC CGCTGTCGAC
ACTGTGCGCA TCCAGGGGCC TGTCGAAGGC TTCCGGTACA TGAACAATGA GGGCCGGGTC
AAGCATCTCG CTGGCGCGTT CTTCACCAAG TGGCTGTACT TCGCCTCTGC GACCACCAGT
GCTGACGATG CCAATGCGGC GCCCATCCTG GACCGGCAGG TACAGGTTTG GTTGAAACTG
GAGGCCAACC TGTTCATCGA TATTCACCGC ACCTCGGACT ACGGGCGCTA TCTCGACGTC
CTACGAGCCT GGGCCGCTGC CTACGACCGC ACCCCGGTGC AGGTCGAGAA AGCGATCTTC
GGGCTGGCGA CCGGACGTAC CTAA
 
Protein sequence
MTQDVPPSLA AVLAEPAVPQ RPFPWNRSAW ATGMHDLPDV QRVLDSLPDG VDRNLVREVV 
NSQLSDGQVL PAFVSAMIWG YGDSGYGPTR VRWVLTGIKT GARDAPVRGD VVESLRAAVD
TVRIQGPVEG FRYMNNEGRV KHLAGAFFTK WLYFASATTS ADDANAAPIL DRQVQVWLKL
EANLFIDIHR TSDYGRYLDV LRAWAAAYDR TPVQVEKAIF GLATGRT