Gene Ping_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3717 
Symbol 
ID4623380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4528020 
End bp4530449 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content41% 
IMG OID639798825 
ProductDNA gyrase, B subunit 
Protein accessionYP_944991 
Protein GI119947311 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.468303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA ATAGTTATGA TTCGTCAAGT ATTAAAGTAC TAAAAGGGTT AGATGCGGTT 
CGCAAACGCC CTGGCATGTA TATTGGCGAC ACAGATGATG GCACCGGTTT ACATCATATG
GTTTTTGAGG TTTTAGATAA CTCAATTGAT GAAACATTGG CGGGTTTTTG TACTGATATT
ATTACTACAA TCCATACCGA CGGCTCAGTT TCTGTACGTG ATGATGGCCG CGGTATTCCT
GTTGATATGC ATGAAGAAGA GGGTGTTTCA GCAGCCGAAG TTATTATGAC CGTGTTACAC
GCCGGTGGTA AGTTTGATGA TAACTCTTAC AAAGTTTCCG GTGGTCTGCA TGGTGTGGGT
GTTTCCGTGG TTAATGCGCT TTCAGAAAAG CTGCGCTTAA CGGTTAAACG CCATGGTCAT
ATTTATCAAC AAACTTATAT TCATGGTGTG CCCGAGGCAC CCATCGCCAT TATTGGTGAT
ACTGAACAAA CTGGTACAGA ACTGCGTTTT TGGCCTAGTA AAGAAACCTT CTCTGACACA
CTGTTTCACT ACGATATTCT GGCAAAAAGA TTACGTGAGC TTTCTTTCTT AAACTCCGGT
GTGTCAATCA AACTTTTTGA TAAACGCGAA GAAGATAAGT CGGATCATTT TCATTATGAA
GGTGGTATTG AAGCCTTTGT TAATTATTTA AATAAAAACA AAACCCCTAT TCACCAGAAG
ATTTTTCACT TCTCAACAGA TCATGAAGAT GGCACTAATG TAGAAGTGGC AATGCAGTGG
AATGATGGTT TTCAGGAAAA CATCTACTGT TTTACCAATA ATATCCCGCA AAAAGATGGT
GGTTCTCATT TAACCGGTTT CCGTGGTGCA TTAACTCGTA CCTTAAATAA TTACATGGAA
AAGGAAATGG GTAAGGTTAA AAACGCGAAG AATAAAACAG CCACTGAAGG CGGTGATTCA
CGCGAAGGTT TAACCGCTGT TATATCCGTA AAAGTGCCGG ATCCTAAGTT CTCTTCACAA
ACAAAAGACC GTTTAGTTTC ATCTGAAGTA CGACCTGTTG TCGAAGGTGC AATGAATGAA
CATCTGCAGG AATTTTTACT GGAAAATCCT GCTGAAGCCA GAATTATAAC GGGTAAAATT
ATTGATGCCG CACGAGCACG TGAGGCAGCC CGTAAAGCCC GTGATATGAC ACGCCGTAAA
GGTGCCTTAG ATTTGGCTGG TTTACCCGGA AAACTGGCTG ATTGCCAGGA AAAAGATCCC
GCTCTTTCTG AACTCTATAT TGTGGAAGGG GACTCCGCTG GCGGCAGCGC TAAGCAGGGA
CGTTCGCGTA AAAACCAGGC GATATTACCG CTTAAAGGTA AAATCCTGAA TGTTGAAAAA
GCACGCTTTG ATAAAATGCT TTCTTCCCAG GAAGTAGCAA CCTTAATCAC AGCCTTAGGT
TGTGGTATTG GCCGCGATGA ATATAATCCG GAAAAAACCC GTTATCATCA TATTATTATT
ATGACCGATG CCGATGTCGA TGGTTCTCAC ATCCGGACAT TGTTACTGAC CTTTTTCTTC
CGTCAAATGC CGGAATTAAT TGAAAATGGT TATATCTATA TTGCTCAACC GCCTTTATAT
AAAATTAAAA AAGGTAAGCA GGAAGATTAC GTTAAAGATG AAGCTGCAAT GCAGGCATTC
TTAACCCGGT TAGCAATGGA AAATTCATCA CTGCATATAA ATTCCGATGC ACCCGGTATT
TCCGGCATCG AACTGGAAAG TATGATTCAG CGTTACCGTA GTGTTCAAGA TACTATTACA
CGTTTATCTC GCCGTTATCC CTCTGCGATG TTAAATAAGC TTATCTATAA ACCTGAACTC
ACGGCCGATA ATCTGGCTAA TTATTCGCTT GTCTCAGAAT GGGCAAACGA TATTGTCGCA
ACCTTAAATC GAGAAGATTT AGGTGGCACA ATTTATAAAA CTGAAGTCAT TAAATCTGAA
GATGAACTGA CCAACAATGT GATTGTTATC GTGCGTAAAC ATGGTGTGGA TAACCGCTAT
CAGCTTGATG AAGAGTTTTT TGGATCATCC GGTTACAAAT CTTTGGTTTC ATTGGGTAAT
GAAATACAGA ACCTTCTGGA AGAGGGTGCA TATATAAAAC GTGGTGAGCG CAGAAAAGAA
GTTAAGAACT TTATTGAAGC GGTAAACTGG TTAATGCATG AAGCAAAACG TGGCCTTTAT
ATACAGCGTT ATAAAGGGCT GGGAGAGATG AACCCTGGCC AGCTATGGGA AACCACGATG
GATCCTAGTG CGCGCCGTAT GCTGCAGGTA ACAATCCAGG ATGCGGTGGG TGCTGACCAA
CTGTTCTCGA CCTTAATGGG CGATCATGTT GAACCTAGAC GTGAGTTTAT AGAAAAAAAT
GCACTGCGGG CTGAAAACTT AGATATCTAA
 
Protein sequence
MAENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVLDNSID ETLAGFCTDI 
ITTIHTDGSV SVRDDGRGIP VDMHEEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG
VSVVNALSEK LRLTVKRHGH IYQQTYIHGV PEAPIAIIGD TEQTGTELRF WPSKETFSDT
LFHYDILAKR LRELSFLNSG VSIKLFDKRE EDKSDHFHYE GGIEAFVNYL NKNKTPIHQK
IFHFSTDHED GTNVEVAMQW NDGFQENIYC FTNNIPQKDG GSHLTGFRGA LTRTLNNYME
KEMGKVKNAK NKTATEGGDS REGLTAVISV KVPDPKFSSQ TKDRLVSSEV RPVVEGAMNE
HLQEFLLENP AEARIITGKI IDAARAREAA RKARDMTRRK GALDLAGLPG KLADCQEKDP
ALSELYIVEG DSAGGSAKQG RSRKNQAILP LKGKILNVEK ARFDKMLSSQ EVATLITALG
CGIGRDEYNP EKTRYHHIII MTDADVDGSH IRTLLLTFFF RQMPELIENG YIYIAQPPLY
KIKKGKQEDY VKDEAAMQAF LTRLAMENSS LHINSDAPGI SGIELESMIQ RYRSVQDTIT
RLSRRYPSAM LNKLIYKPEL TADNLANYSL VSEWANDIVA TLNREDLGGT IYKTEVIKSE
DELTNNVIVI VRKHGVDNRY QLDEEFFGSS GYKSLVSLGN EIQNLLEEGA YIKRGERRKE
VKNFIEAVNW LMHEAKRGLY IQRYKGLGEM NPGQLWETTM DPSARRMLQV TIQDAVGADQ
LFSTLMGDHV EPRREFIEKN ALRAENLDI