Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3715 |
Symbol | |
ID | 4623395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4525767 |
End bp | 4526870 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798823 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_944989 |
Protein GI | 119947309 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.348294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTTT CAATTTCTAG AGAAGCATTT CTTCGTCCGC TGCAACTCGT TGTTAGCTCC GTCGCCGGCG GGCGTCCCGC GTTACCTATA ATGGCTAATA TTTTAATTGA AGTTAAAGAT AACCAATTAA GCCTAACGGG AACAGATCTG GAAGTTGAAC TGATTGCCGT TATCGCACTG GAAAATCCCA GTGAGAATGG TGTTATTACT GTTCCTGCTA GAAAATTACT GGATATTTGT CGGGGTTTAT CTGAGCCCTG TGAAATCAAG TTTCAGGTAA AAGAAGAGAA AGTAACCATA CGCTCAGGCC GTAGTCGTTA CTTACTATCT TCATTGCCAG CTGTTGATTT TCCTAATATA GAATCCTGGC AAAGCCTGGT TGAGTTAACG GTTCCTCAAG CTGAGTTTAA AAAACTGATC GAATTCACCC AGTTTGCGAT GGCCAGCCAA GATGTGCGCT ATTATCTTAA CGGCATGTAT TTTGAAGCTT CTGAACAGAC CTTACGCAGC GTAGCAACCG ATGGGCATCG ACTTGCCTCC TGCTCAATAA AGCTTAATCA AGTTATTGAG CAACAGTCTG TGATTGTGCC AAGAAAAGGG GTGATAGAGT TAGTTAAGCT GCTCGATAAT GATCAGGCAA ATGTCACCAT TCAAATCGGG CAAAATAATT TGCGCGCCGT AATAGATGGC TTTATTTTTA CCACTAAATT GGTCGATGGC CGCTTTCCGG ATTATCGCCG CGTTATCCCT AAAAATGGTG ATAAAGAGTT AATTTCTAAT CGGGAATCAT TAAAGCAGGC TTTTTCTCGT GCGGCCATTT TATCCAACGA AAAATTCAGA GGGGTACGTT TAATTCTTTC TGAAAATCTT CTGCAAATTA CCGCAAACAA TCCGGAAAGA GAGGAAGCTG AAGAATATAT AGATGTTGAT TATCACTCCG CCAACTTAGA AATCGGCTTT AATGTAAGCT ACGTTTTAGA TGTCTTAAAC ACCCTAAAAA GTGAACAGGT TAAAATAACA TTTAGTAATT CAGATCACAG TGCACTAATA GAATCAATTG ATAGTGATGA CTCACTTTAT GTGCTTATGC CAATGCGCTT ATAG
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Protein sequence | MHFSISREAF LRPLQLVVSS VAGGRPALPI MANILIEVKD NQLSLTGTDL EVELIAVIAL ENPSENGVIT VPARKLLDIC RGLSEPCEIK FQVKEEKVTI RSGRSRYLLS SLPAVDFPNI ESWQSLVELT VPQAEFKKLI EFTQFAMASQ DVRYYLNGMY FEASEQTLRS VATDGHRLAS CSIKLNQVIE QQSVIVPRKG VIELVKLLDN DQANVTIQIG QNNLRAVIDG FIFTTKLVDG RFPDYRRVIP KNGDKELISN RESLKQAFSR AAILSNEKFR GVRLILSENL LQITANNPER EEAEEYIDVD YHSANLEIGF NVSYVLDVLN TLKSEQVKIT FSNSDHSALI ESIDSDDSLY VLMPMRL
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