Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3710 |
Symbol | |
ID | 4623390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4517371 |
End bp | 4518060 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639798818 |
Product | ABC transporter foramino acid ATP-binding protein |
Protein accession | YP_944984 |
Protein GI | 119947304 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAT TAAAGAATAT TCATCGTGAC TTTCTGGTTG GAGAGCAAAA GGTACATGCC CTCGATAATA TTAATCTGTC CATTGTGGCG GGTGAATATA TTTCTATTAT GGGACCTTCG GGTTCAGGGA AATCAACCTT GCTGAATTTA ATTGGTCTGT TGGATAGCGC CACGGCAGGC ACTTATTTAT TAAATCAGCA GGATGTTACC GCGCTGCCCG ATGACAAGCA GGCTGCCACC CGCAGTAAAA TTATTGGTTT TGTTTTTCAG GCCTTTCACC TGATCCCCCG ATTAACGGCA GCAGATAACA TAGAGCTGCC TTTAATGCTT GCCGGTATGG AGCCTCTGCA GCGCAGTCCT CTGGTTAACA AAGCGCTCAC AGAAATGGAC TTGAGCGATC GTGCTCACCA TCGACCCGAT CAGCTTTCTG GTGGCCAGCG CCAACGTGTT GCGATTGCCC GTGCCACTAT TATGCAGCCG AAGATATTAC TGGCCGATGA GCCGACGGGT AATCTGGATC AAAAATCCGG TCAGGATGTG ATTAATATTC TCGAGCAGCT TAACCGGCAG GGGATAACGG TCATTATTGT GACTCATGAC AGCAATATTG GCGGGCGGGC AACGCGGCAA TTAAAAATGG TTGATGGCCG TATTGAATCG GATCAGCCTT TATCTCCGGC CTGCTTATGA
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Protein sequence | MIELKNIHRD FLVGEQKVHA LDNINLSIVA GEYISIMGPS GSGKSTLLNL IGLLDSATAG TYLLNQQDVT ALPDDKQAAT RSKIIGFVFQ AFHLIPRLTA ADNIELPLML AGMEPLQRSP LVNKALTEMD LSDRAHHRPD QLSGGQRQRV AIARATIMQP KILLADEPTG NLDQKSGQDV INILEQLNRQ GITVIIVTHD SNIGGRATRQ LKMVDGRIES DQPLSPACL
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