Gene Ping_3710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3710 
Symbol 
ID4623390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4517371 
End bp4518060 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID639798818 
ProductABC transporter foramino acid ATP-binding protein 
Protein accessionYP_944984 
Protein GI119947304 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT TAAAGAATAT TCATCGTGAC TTTCTGGTTG GAGAGCAAAA GGTACATGCC 
CTCGATAATA TTAATCTGTC CATTGTGGCG GGTGAATATA TTTCTATTAT GGGACCTTCG
GGTTCAGGGA AATCAACCTT GCTGAATTTA ATTGGTCTGT TGGATAGCGC CACGGCAGGC
ACTTATTTAT TAAATCAGCA GGATGTTACC GCGCTGCCCG ATGACAAGCA GGCTGCCACC
CGCAGTAAAA TTATTGGTTT TGTTTTTCAG GCCTTTCACC TGATCCCCCG ATTAACGGCA
GCAGATAACA TAGAGCTGCC TTTAATGCTT GCCGGTATGG AGCCTCTGCA GCGCAGTCCT
CTGGTTAACA AAGCGCTCAC AGAAATGGAC TTGAGCGATC GTGCTCACCA TCGACCCGAT
CAGCTTTCTG GTGGCCAGCG CCAACGTGTT GCGATTGCCC GTGCCACTAT TATGCAGCCG
AAGATATTAC TGGCCGATGA GCCGACGGGT AATCTGGATC AAAAATCCGG TCAGGATGTG
ATTAATATTC TCGAGCAGCT TAACCGGCAG GGGATAACGG TCATTATTGT GACTCATGAC
AGCAATATTG GCGGGCGGGC AACGCGGCAA TTAAAAATGG TTGATGGCCG TATTGAATCG
GATCAGCCTT TATCTCCGGC CTGCTTATGA
 
Protein sequence
MIELKNIHRD FLVGEQKVHA LDNINLSIVA GEYISIMGPS GSGKSTLLNL IGLLDSATAG 
TYLLNQQDVT ALPDDKQAAT RSKIIGFVFQ AFHLIPRLTA ADNIELPLML AGMEPLQRSP
LVNKALTEMD LSDRAHHRPD QLSGGQRQRV AIARATIMQP KILLADEPTG NLDQKSGQDV
INILEQLNRQ GITVIIVTHD SNIGGRATRQ LKMVDGRIES DQPLSPACL