| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3696 |
|---|
| Symbol | |
|---|
| ID | 4623496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 4504954 |
|---|
| End bp | 4505676 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639798806 |
|---|
| Product | transcriptional regulator, GntR family protein |
|---|
| Protein accession | YP_944972 |
|---|
| Protein GI | 119947292 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA GATACAGCCC AGAAAAAATT TACAGGCAAA TTGCCAATGC GATTGAGGCG
GATATTCAAG ATGCTTTTGA GCCCGGTGAC TTATATCCAT CGGAGAAAAT TCTGACGGAT
AGGTTTGCGG TCAATCGTCA TACGGTTCGT CGAGCAGTAG AAGAATTAGT CAAACAAGGT
GTCTTGGAAA AACGTCATGG ACTCGGGACT TTTATCGCTG AAAAAAGGTT GGCATATAGC
GTTAAAGGCG ATCAGCGTTT TACAGAATCT GTACAGGTTC ATGACTTGCA GGTTGAAAGT
CTTCTTGTCG ATAAAAAGAT TATTGCTGCT CGTGGTGGTA TTGCAGAAAA ATTGCAATTA
AAGAACGGCG CAGAAGTCTT TCAAATTGAC ACACTGAGAA AAATTGAAGG TAAAGAAGCG
GCATTAATTA GTCACTTTTT ACCAAAAGAT ATTTGCCCGA CGGCATTCGC TAAATATGAA
TCTGGTTCAC TAGGAGAATT TTTAAAAGCA GAGTGTGGCA TTCAAACAAA AAGAGTGTCG
AGCTTAGTCT CTGCCACGAG ATCAAACGAA CAAGACAGTT TCAGACTGGG TATGTCAAGT
AACCGACCTA TCTTGAAAGT GAAAACAATT AATGAAGATA CACAAACTGG CAAAAGAGTT
GAATACTCGA TCACCCGGTT TAGGTCCGAC ATGATTCAAC TTGAAATTTT AATGAACGCT
TAA
|
|---|
| Protein sequence | MINRYSPEKI YRQIANAIEA DIQDAFEPGD LYPSEKILTD RFAVNRHTVR RAVEELVKQG
VLEKRHGLGT FIAEKRLAYS VKGDQRFTES VQVHDLQVES LLVDKKIIAA RGGIAEKLQL
KNGAEVFQID TLRKIEGKEA ALISHFLPKD ICPTAFAKYE SGSLGEFLKA ECGIQTKRVS
SLVSATRSNE QDSFRLGMSS NRPILKVKTI NEDTQTGKRV EYSITRFRSD MIQLEILMNA
|
|---|
| |