| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3673 |
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| Symbol | |
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| ID | 4623507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 4484915 |
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| End bp | 4486231 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639798787 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_944953 |
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| Protein GI | 119947273 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCTC TAATTCTTAG TGCCTTGGTC GGTATAACGA CCATTCTTAT ATTGTTTTCT
GGTGTATCTG TTGGTATTGG TTTGCTCGTA GTTTCAGGAT TATTTTTGAT TGTTTTTGAT
GGATTACAGT CGTTACAGCT AATGCCAGAA ATATTTTTTG GCAAATTGGA TAGCTTTGCT
CTTTTATCAA TCCCTATGTT TATTCTCATG GGATCGACTA TATCCTCTAC AAAAGCAGGC
GCTGATTTGT ATGAAGCGCT AGAGCGATGG TTAACAAGAG TTCCCGGTGG TTTAGTGGTA
TCAAATTTGG GGGCTTGTGC TCTGTTTGCT GCTATGTCCG GTTCTAGCCC TGCCACTTGT
GCAGCGATTG GGAAAATGGG TATTCCTGAA ATGCTTAAGC GAGGTTATCC TGAAGGAATT
GCAACCGGAT CAATTGCTGC CGGTGGTACA TTAGGAATTT TAATTCCTCC ATCAGTCACC
ATGATTGTTT ATGGCATTGC AACAGAGACA TCAATTGGTC GTTTATTTCT TGCAGGAGTG
CTGCCTGGCC TGATGCTTGT GGGATTGTTC ATGGCTTGGT CTATATACGC AACTTGGCGT
TCAGGTAACC GTGCGTTAAT GACACCAATC AATTATAGCT GGCGAGAAAA ATTCGAAATA
CTGCCTCGTG TATTACCATT TGTTGGCATT ATTATTGCTG TGCTTTATAC CATGTATGGC
GGTATTGCAA CGCCATCTGA AACAGCAGCT CTGGGCGCAA TAATGTGCTT AGTTGTTGCG
ATGATTATTT ATCGTTTAAC TAGTCCGAAA GATTTGTGGA CAATATTGCG CGATAGCACC
AGAGAGAGCG TAATGATTTT ATTTATCATT GCAGCAGCGG GCGTTTTTTC TTATATGTTG
TCTAGCCTTT ATATTACTCA AGCAATAGCT GAGTGGATTG GAGCACTAGA AATTAATCGT
TGGAGTTTAA TGATTTTAAT TAATTTCTTT TTGATTATAG CGGGATTCTT CCTCCCTCCG
GTAGCAGTAA TTTTAATGAC AGCCCCTATT TTGTTGCCTG TGCTTATGAA TGCTGGCTTT
GACCCTATCT GGTTTGCTGT AGTCCTTACC ATCAATATGG AAATTGGTTT AATTTCACCA
CCAGTCGGTT TAAATCTTTA TGTGATTAAT GGCATTACTC CAAACATTTC TTTGAAAACT
ATTCTGTGGG GTTCATTACC TTTTGTTGCC TGCATGATTA TTGCCATTGT TTTACTCTGC
TTGTTCCCTA GCATTGCTAC ATGGCTACCT GAGGCCGTAA TGGGCTCAGC TATATAA
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| Protein sequence | MDPLILSALV GITTILILFS GVSVGIGLLV VSGLFLIVFD GLQSLQLMPE IFFGKLDSFA
LLSIPMFILM GSTISSTKAG ADLYEALERW LTRVPGGLVV SNLGACALFA AMSGSSPATC
AAIGKMGIPE MLKRGYPEGI ATGSIAAGGT LGILIPPSVT MIVYGIATET SIGRLFLAGV
LPGLMLVGLF MAWSIYATWR SGNRALMTPI NYSWREKFEI LPRVLPFVGI IIAVLYTMYG
GIATPSETAA LGAIMCLVVA MIIYRLTSPK DLWTILRDST RESVMILFII AAAGVFSYML
SSLYITQAIA EWIGALEINR WSLMILINFF LIIAGFFLPP VAVILMTAPI LLPVLMNAGF
DPIWFAVVLT INMEIGLISP PVGLNLYVIN GITPNISLKT ILWGSLPFVA CMIIAIVLLC
LFPSIATWLP EAVMGSAI
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