Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3668 |
Symbol | |
ID | 4623502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4481273 |
End bp | 4482076 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798783 |
Product | integrase catalytic subunit |
Protein accession | YP_944949 |
Protein GI | 119947269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCGTA GTGCATTTTA TGATTGGCTT GAACGGCCAG TTAAAATAAA TAGTGAAGAA GAGCTGAATA TGTACCGTAC GGCGCGTCAG CTATTTAAAC GCAGTCGTGG CAGTTTAGGC TCTCGCCAGT TGTGCAAGAA CTTGAGACGA GCGGGTTTTA ATGTGGGCCG TTACTGTACG CGCAGCATCA TGCGTAAGCT GAAACTTGTG GTGACCCAAC GCCAGGCATA TAAAGTAACA ACAAAGCGTA AGCATAGTAA TAGCGTTGCT GATAACGTAT TAAACCAGCA GTTCAATCCC GCACAGGTAA ACTTGGTTTG GGCGGGTTAT GTAACGTATT TGAGAACCAA TCAAGGCTGG ATGTATTTAG CCATTGTCAT GGACTTATAC TCCCGCAGGG TTGTCGGTTG GTCTATCTCG AAACGTATGA CTGTTGATTT AGTTGAACGC GCATTACAAA TGGCGATTAA CATCAGGGAA CCTAAAGCTG GATTAATGTT CCATAGTGAT AGAAGCGCTC AATATACTAG CGGGCGATTT AGTCGATTGC TGAACAAGTA TAAAATAACA GCCTCAATGA GCAGTGTCGG TGCTTGTTTA TATAACGCTG TTGTAGAACG ATTTTTTGGC AGTTTAAAGA ATGAATGGTT ATTAAATGTT GTGCATTTAA CACGTGAAAT GATGAAGATG GATGTTGAAG AATATATCCG TTATTACAAC CATGAACGAC TTCATACAAC ACTCGGTGAT TTAACGCCGA TTAACTATGA AAATTTACAA AGTCAGGTGT CCGGTTGGAC TTGA
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Protein sequence | MSRSAFYDWL ERPVKINSEE ELNMYRTARQ LFKRSRGSLG SRQLCKNLRR AGFNVGRYCT RSIMRKLKLV VTQRQAYKVT TKRKHSNSVA DNVLNQQFNP AQVNLVWAGY VTYLRTNQGW MYLAIVMDLY SRRVVGWSIS KRMTVDLVER ALQMAINIRE PKAGLMFHSD RSAQYTSGRF SRLLNKYKIT ASMSSVGACL YNAVVERFFG SLKNEWLLNV VHLTREMMKM DVEEYIRYYN HERLHTTLGD LTPINYENLQ SQVSGWT
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