Gene Ping_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3648 
Symbol 
ID4624066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4461793 
End bp4462524 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content45% 
IMG OID639798764 
Productdihydrodipicolinate reductase 
Protein accessionYP_944930 
Protein GI119947250 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACAG TTATCGTAAA TGGTGCAAAA GGGCGTATGG GCAGTGAAGC TGTTAATGCG 
ATAAATAACG ACCCGGCACT GCAATTGGTT GGGCAGTGTG ATGTTGGTGA TGACTTAACC
CAGCTTATTA TTGCGTCTGG TGCACAGGTG GTGGTTGATT TGACTGCGGC TTCTGCTGGT
TTTAATAATA CCAAAACTAT TTTAAATGCA GGTGCTCGGC CTGTTGTTGG TACAAGTGGC
TTTCAAGTTG AACAAGTAAA AGAACTGCAG GCATTAGCGG CGGAGAAAAA ATTAGGTGGT
TTAATTGCGC CTAATTTCTC CGTGGGGGCT GTATTGATGA TGAAATTTGC AGCAGAAGCG
GCCAAATATC TACCTGATGC TGAAATTATC GAAGCGCACA GTACGCAAAA AGAGGAAAGC
CCTTCTGGTA CAGGTATCCG CACCGCAGAG TTAATTGCAC AAGCGCGCAT TAAAAACGCG
ACGGCTTTTA ATGATACAGA GCTACTCGAG GGTGCTCGCG GGGCCGAGTT ACATGGTGTG
AAAATACATT CTATACGCTT ACCCGGGGTG GTCGCACAAC AAACGGTTTT CTTTGGCGGT
TTAAGTGAAA CCTTAAAGAT TGAGCATAAC TCGTTGCATC GGGAGTCATT TATGCCGGGT
ATTTGTCTGG CTTGTAAGCA GGTCGTAAAG CGTAATGAAT TAGTTTACGG CTTAGAGCAT
TTGATGGATT AA
 
Protein sequence
MVTVIVNGAK GRMGSEAVNA INNDPALQLV GQCDVGDDLT QLIIASGAQV VVDLTAASAG 
FNNTKTILNA GARPVVGTSG FQVEQVKELQ ALAAEKKLGG LIAPNFSVGA VLMMKFAAEA
AKYLPDAEII EAHSTQKEES PSGTGIRTAE LIAQARIKNA TAFNDTELLE GARGAELHGV
KIHSIRLPGV VAQQTVFFGG LSETLKIEHN SLHRESFMPG ICLACKQVVK RNELVYGLEH
LMD