Gene Ping_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3641 
Symbol 
ID4624097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4455661 
End bp4456395 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID639798757 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_944923 
Protein GI119947243 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG CGCGCTTATT AGTGACACGT TTTGCACCTC ATGCACAACG CTTAGTGAAT 
TTACTCAATG CGCAGGGGAC GGTTGCCTTT GCGCAACCCT TATTGGCACT TCAGAAAACA
ACAGAATTTA ACCATGCAAG TAAAGTGTTG GCAAAAAATT ATGATTATAT TATCGCGGTA
AGTCCCAATG CGGTTGACTA TACCCAGAAG GCTCTGGCGG GTATCAACTG GCCGCAGACT
GAATATTTAG CTGTTGGATT AGCGACTCAG GCTAAGCTAA AAGCAGCAAC CACGCAGAAT
GTCGTTGTGC CTGAAAAATG CTTTGATAGT GAAGGGTTAC TTGATTTACC CTTATTACTG
AATTTACAGG GTAAGCATAT CCTTATTTTA CGCGGAGTCG GCGGCCGTGA GTTACTCTGT
GACACCTTAA GACAACGCGG GGCAATCGTT GATTATTATC AGCCTTATCA ACGTGTTGCT
ATTGTACTGT GTGGGAAAGC TTTAATAAAA GAATGGCAAC AACAAAATAT TAATGGTGCT
ATTATCAGTA GTATTGAATT GCTGGAAAGA TTAATGTCTG TTGTGCCGCT TGCCGCGCAT
GAATGGTTGA AGGAGCTTAC TATTTATGCC CCAAGTGAGC GTATACTCGA TCAGGCAAAG
CGTTGGGGCT GGTCAAATAC AAAAGTACTT CCCGGAATGT CTGATCAGCA AGTGATTGAT
TATTTTAAAC ATTAG
 
Protein sequence
MKEARLLVTR FAPHAQRLVN LLNAQGTVAF AQPLLALQKT TEFNHASKVL AKNYDYIIAV 
SPNAVDYTQK ALAGINWPQT EYLAVGLATQ AKLKAATTQN VVVPEKCFDS EGLLDLPLLL
NLQGKHILIL RGVGGRELLC DTLRQRGAIV DYYQPYQRVA IVLCGKALIK EWQQQNINGA
IISSIELLER LMSVVPLAAH EWLKELTIYA PSERILDQAK RWGWSNTKVL PGMSDQQVID
YFKH