Gene Ping_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3640 
SymbolhemX 
ID4624096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4454454 
End bp4455596 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content40% 
IMG OID639798756 
Producturoporphyrin-III C-methyltransferase HemX 
Protein accessionYP_944922 
Protein GI119947242 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA GTAATAATGA TAATGATAAT GAAGAAATAA TCGATAATGA GGAGCTCAAA 
TCTGACCTTT CGGCTGCTGA ATCAGAAAAT ATCCCCGTCA ATAAAAACCC TAAAAGCAGC
AAATCAGCGC TGGTTATTGC TTTATTAGCC CTGTTTCTGA TTGTTACTTT AATTTTATCA
GCAGGTTATT TTTATAAACT GAATAAAACG CTAACGGATC AGCAGCAAGC CAAAATGGCT
CAGTTGAGTA GCAGTTTATC TTCTCAGGAA GCCACCCTTA ATCAACAAAA TGCAACGTTA
GAGTCGGCAT TAGTGCAGGT TAATCAGCAA CTTCGACAAG TGAAAAATCA AAATAAGCTT
TATAGCAGCG ATCTGCAGTC TTTACAGCGC CGCATGGCAG AAACAACAGT GCGTCACCCA
AATGATTGGA TTCTGGCTGA AGTGGAATAC CTAATACGTT TAGCGGGCAG TAAAATTTGG
TTAGAAAGTG ATCTGGCAAC AGCCGTTGCG CTTCTTAGCG CTGCTGATCA GCGTCTGCTG
GTATTAAGCG ATCCTAGTCT TAATCCATTG CGCTCTGCAT TATTAGAAGA TATTAACAGT
TTAGAATCTT TACCGAAACG CGATCCTGAT GGTCTGATTT TAGCGCTTTC TAACCTTGAA
AGTAGGGCGG ATAAACTGCT GGTGGTGGGG TTAAATTTAT CAACACCGGA CAGCAAAGAT
AAAAGTGAAG TTTCAACTGA TATTAAAGAT TGGAATGAAA ACTTATCCAA ATCATGGCGC
AGTTTTGTTG AGAGTTTTGT GGTTATCAAT AAACGTGATG TGAAAGTACA AGCGTTACTC
TCTTCGGAGC AAAAGTGGTA TTTACAGGAG AATTTACGCG CGGAGCTCGC TAAGGCTGAG
TTTGCAGTTT ACCGTGAGCA GCAAGATATT TATGACATAG CGATGCAAAC TGCGTCTGAT
TTATTAACTG ATTATTATGA TTTAACCGAT AATACCACCA ACTACTTTTT CAAATCTATT
CAGAGTTTAA GAGATAAAAA GGTGTCCGTT GATTACCCCG ATCAGTTAAA AAGCGCAACT
GTACTGGCGC GTATAATGAC ACAGCGGGTA AACAAATCAC TCGCTAATTC GACTGAAGAA
TAG
 
Protein sequence
MTKSNNDNDN EEIIDNEELK SDLSAAESEN IPVNKNPKSS KSALVIALLA LFLIVTLILS 
AGYFYKLNKT LTDQQQAKMA QLSSSLSSQE ATLNQQNATL ESALVQVNQQ LRQVKNQNKL
YSSDLQSLQR RMAETTVRHP NDWILAEVEY LIRLAGSKIW LESDLATAVA LLSAADQRLL
VLSDPSLNPL RSALLEDINS LESLPKRDPD GLILALSNLE SRADKLLVVG LNLSTPDSKD
KSEVSTDIKD WNENLSKSWR SFVESFVVIN KRDVKVQALL SSEQKWYLQE NLRAELAKAE
FAVYREQQDI YDIAMQTASD LLTDYYDLTD NTTNYFFKSI QSLRDKKVSV DYPDQLKSAT
VLARIMTQRV NKSLANSTEE