Gene Ping_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3626 
Symbol 
ID4625140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4442135 
End bp4442938 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content37% 
IMG OID639798742 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_944908 
Protein GI119947228 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGA GTATCAGTAT TTTGGGTAGC GGCTGGTTAG GTTTACCTTT GGCCGAACAG 
TTACGGCCAG ACTTTGACTC GGTTAATATT TCAACACGTA GGAATGACAA AGTGGCACTT
TTATTATCTG CCAGATTACA GCCTTTTATT ATTGATATTG ACAATATCAC GGATAATATT
CAGCCATTTT TACAGTCGAA TACTCTCATT ATTAATATCA CCAGTAAAAA TGTCGAGGGG
TTTAAAAACC TGATTAAAGA AATTGAAATG TCACCTGTTA AAGAAATTTT ATTGGTCAGT
TCAACATCAG TTTACCCGTC AGAAAATCGG CTGTGTCAGG AATCCGAGCC ACTCGATATG
AGCTCACATC CTTTATTAAT TATCGAGGAG CTGTTTAATC AGAATAAACA TTTTAAAACC
ACTATTGTAC GCTTTTCAGG TTTAATTGGC GGTAAGCGTC ATCCTGGGCG ATTTTTTGCT
TCGGGAAAAG CGATTCAGTT CGCCGATGCG GGGGTTAATA TGATCCATAT AACTGATTGT
CTGGCCATTA TAGGCATTAT TATCAAGCGT CATATTTTTC CGGAACTGCT CAATGCCTGT
GCGGATACTC ATCCGAGTAA AGCACAATTT TATACCCTTA ACGCCTTGGC CTTAGGTTTT
AATAAACCAA ATCTGAGTGA TAAAAATACA CCATCTAATA AAATAGTAAG TAATGAAAAG
CTTAAAAAAT GCTTAAATTA TCAATTTATT TATGGCGATC TGATGCAGCT GGATCCGATC
AGAGATTATG ATTTAACGGT TTAG
 
Protein sequence
MQKSISILGS GWLGLPLAEQ LRPDFDSVNI STRRNDKVAL LLSARLQPFI IDIDNITDNI 
QPFLQSNTLI INITSKNVEG FKNLIKEIEM SPVKEILLVS STSVYPSENR LCQESEPLDM
SSHPLLIIEE LFNQNKHFKT TIVRFSGLIG GKRHPGRFFA SGKAIQFADA GVNMIHITDC
LAIIGIIIKR HIFPELLNAC ADTHPSKAQF YTLNALALGF NKPNLSDKNT PSNKIVSNEK
LKKCLNYQFI YGDLMQLDPI RDYDLTV