Gene Ping_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3625 
Symbol 
ID4625139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4441115 
End bp4442095 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content41% 
IMG OID639798741 
ProductNa+/Ca+ antiporter, CaCA family protein 
Protein accessionYP_944907 
Protein GI119947227 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAACAT TATTACTGCC CGCCCTTGCG ATTATCATTG GCTTTGCTTT ACTCATCTGG 
AGTGCTGATA AATTCGTTTT AGGTGCCTCA AATACTGCGC GTAGTTTTTC AATATCACCG
CTTATTGTCG GCGTAGTGAT TGTCGGTTTA GGGACCTCTG CACCGGAAAT GTTAGTCTCC
GCAATAGCAG CTGCTCAGGG TAATACAGGT CTTTCTATCG GTAATGCGAT CGGTTCAAAC
ATTACCAATA TTGGTTTAAT GTTAGGCGTG ACCGCTATTT TCTATCCGCT GCATATTCAT
TCAAAACTGC TTAAACGGGA AATGCCGCTA TTATTGGCAC TGCTTATATT TAGTTTATTT
TTACTTTGGG ATCAGAGACT TGGATTTTTA GATGGTCTGA TTCTATTAAC TATGATGGCT
GCCATGTTGG TGTTTACAGT ATGGGAAGCG AAAAGTCATA ACACCGATAG CCTGCCACAG
GAAATACTCG ATGAGTTGCC GGAGGAGGTA AGTAAAAGGG ATGCATTAAA ATGGTTAATC
ATTGGTATTG TGCTATTAAT AGCGTCTTCT CGTCTTCTTG TTTGGGGCGC TGTTGATGTT
GCTACCTACT TTGGTGTCAG TGATTTAATT ATTGGTCTAA CTATTGTAGC GATTGGCACC
AGTTTACCGG AGCTGGCCGC CACTATAGCA GCAGCACGTA AAAAAGAGTT TGATTTAGCT
GTCGGCAATA TTATCGGCTC CAATATCTTT AATATCTTAG GCGTAATGGC GTTACCCGGA
TTGATTCATC CGGACAACTT TGATAGCGAA GTATTAACCC GAGATTATCC GGTGATGATA
GCGTTAACCG TTTTGTTGAT GCTTTTTTCA ACCTCATGGC GAAAAGGTAA AACCGCTGTT
TTAGGGCGTA TTAACGGGGT CATATTATTA ACCGCTTATA TTGCTTACAT GGTCTGGTTA
TTTATTGATA TGAGCGCTTA A
 
Protein sequence
MITLLLPALA IIIGFALLIW SADKFVLGAS NTARSFSISP LIVGVVIVGL GTSAPEMLVS 
AIAAAQGNTG LSIGNAIGSN ITNIGLMLGV TAIFYPLHIH SKLLKREMPL LLALLIFSLF
LLWDQRLGFL DGLILLTMMA AMLVFTVWEA KSHNTDSLPQ EILDELPEEV SKRDALKWLI
IGIVLLIASS RLLVWGAVDV ATYFGVSDLI IGLTIVAIGT SLPELAATIA AARKKEFDLA
VGNIIGSNIF NILGVMALPG LIHPDNFDSE VLTRDYPVMI ALTVLLMLFS TSWRKGKTAV
LGRINGVILL TAYIAYMVWL FIDMSA