Gene Ping_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3616 
Symbol 
ID4625130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4431857 
End bp4433068 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content41% 
IMG OID639798732 
Productacetylornithine and succinylornithine aminotransferases 
Protein accessionYP_944898 
Protein GI119947218 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACC CTGCTATCAC TCGCGCGCTT TTTGATCAAA TTATGGTGCC CAATTATGCC 
CCTTTAGCAA TGATCCCTGT TCGTGGTGAA GGCTCTCGTG TTTGGGATCA AGAAAATCGT
GAATATATAG ACCTAACCGG TGGAATCGCT GTAAATGCAC TCGGCCATGC ACATCCGGAA
TTAGTAACGG CATTAACGGA GCAAGCTAAA AAACTATGGC ATGTCAGTAA TTATTATACC
AATGAACCTG CTTTACAATT GGCACAGCAG ATTATTGATA ATACTTTTGC TGAAAAAGTT
TTTTTTGCAA ATTCTGGGGC AGAAGCCAAT GAAGCCGCAT TAAAATTAGC GCGTCGTTTC
GCTTTTGATA ATTACGACAA AGAAAAAACT GAAATTATCG CTTTCCATCA CGGTTTTCAT
GGACGAACAT TTTTTACAGT CAGTGCGGGT GGTAGTACCT CTTACTCCAA TGGTTTTGGG
CCCAAACCAG GCGATATAAC ACACCTTGAT TACAATGATT TAAGCGCATT AGAAAATGCA
ATGTCTGATA AAACCTGCGC TGTTTTACTT GAGCCTCTGC AGGGTGAAGG CGGTGTTTTG
CCGATCGATA AATCCTTTGC TCAGGGTGTC CGTAAACTCT GTGATAAATA TAATGCGCTA
ATGATTTTAG ATGAAGTACA AACGGGTATG GGCCGCACCG GTTCATTATT TGCCTATATG
GCATTAGGTG TTATCCCAGA TGTACTTACC TCTGCAAAAT CCTTAGGAGC AGGTTTCCCT
ATTTCAGCAA TGTTAACCTT AGATAAATTT GCCAGCTGCC TGACGGTAGG AACACACGGC
ACAACATTTG GTGGCAATCC GCTTGCTTGT GCCGTTGCCA GCAAAGCCTT TGAATTAATT
AATAACGAGA CCCTCTTAAA CGGGGTAAAA GAAAAAGAAC ATTTAATACG TCATGCTCTG
GAGAAAATAA ACCAACAATA TGATGTTTTT AAAGAGGTTC GTGGGGCAGG TTTATTACTG
GGAGCAGTTT TAAATGACCA GTACCAGGAT CGAGCAAAAG ATTTACTGCT GGCAAGTGCA
GATCAAGGTT TATTAGTACT GGCTGCAGGT GCAAATGTGA TCCGTTTCGC ACCCGCTCTC
AACATCAGTC ATCAAGAAAT AGATCAGGCC ATGGATAAAT TTAAACAAGC AGTAAAAGTA
CTAACTAAAT AA
 
Protein sequence
MSNPAITRAL FDQIMVPNYA PLAMIPVRGE GSRVWDQENR EYIDLTGGIA VNALGHAHPE 
LVTALTEQAK KLWHVSNYYT NEPALQLAQQ IIDNTFAEKV FFANSGAEAN EAALKLARRF
AFDNYDKEKT EIIAFHHGFH GRTFFTVSAG GSTSYSNGFG PKPGDITHLD YNDLSALENA
MSDKTCAVLL EPLQGEGGVL PIDKSFAQGV RKLCDKYNAL MILDEVQTGM GRTGSLFAYM
ALGVIPDVLT SAKSLGAGFP ISAMLTLDKF ASCLTVGTHG TTFGGNPLAC AVASKAFELI
NNETLLNGVK EKEHLIRHAL EKINQQYDVF KEVRGAGLLL GAVLNDQYQD RAKDLLLASA
DQGLLVLAAG ANVIRFAPAL NISHQEIDQA MDKFKQAVKV LTK