Gene Ping_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3605 
Symbol 
ID4625155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4419589 
End bp4420704 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content41% 
IMG OID639798721 
Productalanine dehydrogenase 
Protein accessionYP_944887 
Protein GI119947207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTG GCGTCCCTAA AGAAATTAAA AACCACGAAT ATCGTGTAGG TATGGTTCCA 
GGTAGCGTAC GTGAATTAAC CAATCATGGG CATCAGGTTA TTGTTGAGAC AAATGCCGGT
TTAGGCATAG GTTTCAGTGA TCAGGACTAC ATTAATGTTG GTGCATCAAT ACAAAAAAAT
GCGGCAGAAG TCTTCGCCAG CGCTGACATG ATAGTTAAGG TAAAAGAACC TCAAGCAGTT
GAACGTGCTA TGTTGCGTGA AGGACAAATT TTATTTACTT ACCTTCACTT GGCACCTGAT
CTTCCGCAAA CTGAAGATTT GATTAAATCA AAAGCAATTT GTATTGCCTA TGAAACAGTT
ACTGACAATC AAGGTGGTTT ACCTCTTTTA GCCCCAATGT CAGAGGTTGC GGGACGCATG
TCAATTCAAG CAGGTGCCCA AGCTCTTGAA AAATCAAATG CAGGCCGTGG TATGTTATTA
GGTGGTGTTC CTGGTGTTGC TCCTGCCAAG GTCGTCATTA TTGGTGGCGG AATGGTTGGT
AATAATGCAG CACAAATGGC CGTAGGCATG GGTGCTGAAG TGGTTATTCT AGATCGTAAT
GTTAATGTGT TACGTCGTCT TGATGCGCAG TTTGGTAATA AAATAAAAAC GGTCTATTCA
ACAGCGGAAG CGCTTGAAGA ACATGTTCTT GAAGCCGATT TAGTAATTGG CGGAGTACTG
GTTGCCGGCG CAGCTGCCCC TAAATTAGTT ACAGCTGAAC ATATTAAAAA CATGAAAGCG
GGCTCTGCTA TTGTTGATGT TGCAATTGAT CAAGGTGGCT GTATTGCTAC GTCAAAAGCA
ACAACACACG CAGATCCAAC CTTTATTGTT GATGATGTAG TGCACTACTG TGTTGCTAAT
ATGCCCGGTG CTGTTCCACT GACATCAACC TTTGCATTGA ATAATGCAAC ACTGCCCTTT
ATTATAAATC TTGCTAATAA AGGTTATAAA GAAGCTTTAT TAAGTGACCA GAATTTCTTA
AATGGCCTAA ATGTTATCAA TGGTAAGATA ACTTGTGCCA GCGTGGCAGA AAACTTAGGA
TTTGAGTTTG TTGATCCTAA AGTCGCATTA GCATAA
 
Protein sequence
MIVGVPKEIK NHEYRVGMVP GSVRELTNHG HQVIVETNAG LGIGFSDQDY INVGASIQKN 
AAEVFASADM IVKVKEPQAV ERAMLREGQI LFTYLHLAPD LPQTEDLIKS KAICIAYETV
TDNQGGLPLL APMSEVAGRM SIQAGAQALE KSNAGRGMLL GGVPGVAPAK VVIIGGGMVG
NNAAQMAVGM GAEVVILDRN VNVLRRLDAQ FGNKIKTVYS TAEALEEHVL EADLVIGGVL
VAGAAAPKLV TAEHIKNMKA GSAIVDVAID QGGCIATSKA TTHADPTFIV DDVVHYCVAN
MPGAVPLTST FALNNATLPF IINLANKGYK EALLSDQNFL NGLNVINGKI TCASVAENLG
FEFVDPKVAL A