Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3605 |
Symbol | |
ID | 4625155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4419589 |
End bp | 4420704 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798721 |
Product | alanine dehydrogenase |
Protein accession | YP_944887 |
Protein GI | 119947207 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0686] Alanine dehydrogenase |
TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGTTG GCGTCCCTAA AGAAATTAAA AACCACGAAT ATCGTGTAGG TATGGTTCCA GGTAGCGTAC GTGAATTAAC CAATCATGGG CATCAGGTTA TTGTTGAGAC AAATGCCGGT TTAGGCATAG GTTTCAGTGA TCAGGACTAC ATTAATGTTG GTGCATCAAT ACAAAAAAAT GCGGCAGAAG TCTTCGCCAG CGCTGACATG ATAGTTAAGG TAAAAGAACC TCAAGCAGTT GAACGTGCTA TGTTGCGTGA AGGACAAATT TTATTTACTT ACCTTCACTT GGCACCTGAT CTTCCGCAAA CTGAAGATTT GATTAAATCA AAAGCAATTT GTATTGCCTA TGAAACAGTT ACTGACAATC AAGGTGGTTT ACCTCTTTTA GCCCCAATGT CAGAGGTTGC GGGACGCATG TCAATTCAAG CAGGTGCCCA AGCTCTTGAA AAATCAAATG CAGGCCGTGG TATGTTATTA GGTGGTGTTC CTGGTGTTGC TCCTGCCAAG GTCGTCATTA TTGGTGGCGG AATGGTTGGT AATAATGCAG CACAAATGGC CGTAGGCATG GGTGCTGAAG TGGTTATTCT AGATCGTAAT GTTAATGTGT TACGTCGTCT TGATGCGCAG TTTGGTAATA AAATAAAAAC GGTCTATTCA ACAGCGGAAG CGCTTGAAGA ACATGTTCTT GAAGCCGATT TAGTAATTGG CGGAGTACTG GTTGCCGGCG CAGCTGCCCC TAAATTAGTT ACAGCTGAAC ATATTAAAAA CATGAAAGCG GGCTCTGCTA TTGTTGATGT TGCAATTGAT CAAGGTGGCT GTATTGCTAC GTCAAAAGCA ACAACACACG CAGATCCAAC CTTTATTGTT GATGATGTAG TGCACTACTG TGTTGCTAAT ATGCCCGGTG CTGTTCCACT GACATCAACC TTTGCATTGA ATAATGCAAC ACTGCCCTTT ATTATAAATC TTGCTAATAA AGGTTATAAA GAAGCTTTAT TAAGTGACCA GAATTTCTTA AATGGCCTAA ATGTTATCAA TGGTAAGATA ACTTGTGCCA GCGTGGCAGA AAACTTAGGA TTTGAGTTTG TTGATCCTAA AGTCGCATTA GCATAA
|
Protein sequence | MIVGVPKEIK NHEYRVGMVP GSVRELTNHG HQVIVETNAG LGIGFSDQDY INVGASIQKN AAEVFASADM IVKVKEPQAV ERAMLREGQI LFTYLHLAPD LPQTEDLIKS KAICIAYETV TDNQGGLPLL APMSEVAGRM SIQAGAQALE KSNAGRGMLL GGVPGVAPAK VVIIGGGMVG NNAAQMAVGM GAEVVILDRN VNVLRRLDAQ FGNKIKTVYS TAEALEEHVL EADLVIGGVL VAGAAAPKLV TAEHIKNMKA GSAIVDVAID QGGCIATSKA TTHADPTFIV DDVVHYCVAN MPGAVPLTST FALNNATLPF IINLANKGYK EALLSDQNFL NGLNVINGKI TCASVAENLG FEFVDPKVAL A
|
| |