Gene Ping_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3603 
Symbol 
ID4625153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4417560 
End bp4418915 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content45% 
IMG OID639798719 
Productpyruvate dehydrogenase complex, E2 component dihydrolipoamide acetyltransferase 
Protein accessionYP_944885 
Protein GI119947205 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA ATGAACATGA CTTAAAGATG CCCTCTTTTG GTTCTGATAT GAAAAAAGGA 
ACCCTAGTAC AGTGGCTGGT TAAAGAGGGT GACCATATAA AACGGGGTGA TGTGGTTGCA
GTTATTGAAA CTCACAAAGG GGCAATAGAT TTAGATCTAT TTGAAGATGC ATTAATAATC
AGCTTACTGA TCAAAGAAGG GCAGCAGATC GCGGTTGGAG AGCCTATTGC CAGATTAAGC
TCGACTAAAG ACAGTGAAAA TGCCCCCCTT CCTCAGACAG ATGTTGCCGA TATCGAGCCT
AACCCTATAT CCACAACAAG CCCTGTAAAT ATAAGTGCAA GCCCTGCCTC CACAACAACT
GCCACAGATA TAAGTTCAAG CCCTGCGTCC AGTGCAGTTG AGCAAGATAA CAGTAATTTC
ACAACCCCTA AAGATTTTAT TTTAGCAACA CCCGCAGCGC GATTTTTGGC AACACAGCAG
CAACTCACTT TAAACTCACT GTTTCCCGAG CCTAGCAATA AAATTGTTAC TTTGACTATG
GTCGAGCAAG CAATAAAACA AAAACAGCTC AGCCAGCAGT CACCCGCGAT GACAGAAAAT
GTGCTGAAGC CTGCAGATAA AAAAGAAACC GCTAAGGTCA AAGCCACCGA TAGAGCAGCT
GCAAGACCTA AAAAAGGTTT TGATAAAGAA GCGATGCGCC AAGCGATTAG CGCAACCGTG
ACACGCTCAA AACAACAAAT ACCACATTAT TATTTACGCC AGCGTTTGGA TATAACAGCG
TTAGAGGACT ACTTATTGCA GGTTAACGCC AAGCTCGCCA TCGATCAGCG CCTGCTCTTA
GCAGCGCCTT TATTGTGTGC CGTTGCGCGT ACATTAATGG ATAGCCAGCA ACTTAATGGC
GAATATACAG AGGGCCACTT TGTCGCGAGT GAAGCAATAC ATTTAGCCAA TGCGATTAAT
TTACGTGGCG GAGGATTAGT AATGCCAGTC ATCCGCGCAG CACAAACTCT CTCCCCCTCG
AAGATGATGG AACGTCTTAA ACAGCAGGTG ACACATGCGC GCAACGACAG TTTAGTCTTT
TCTGAATTGA GTGGAGGCAG TTTTACTGTA ACCAGCATTG GTGAACGTGG TGCAGAGCAG
ATGTTCGCTG TTATTTTTCC ACCACAGGTG GCGATTCTGG CTTTAGGTAG CCCTCATCAA
GAGGTCATGG CCGTCGATGG TTCGATAAAA ATACGTTCAG TTATTGAGGC TTCTCTGGCG
GCCGATCATC GTGTCAGTGA TGGACGCATC GGAGCCCGTT TTCTTTATCA GTTAAACCAA
CTGCTGCAAA ATCCGGAAGC TTTATGGACA GTTTGA
 
Protein sequence
MSNNEHDLKM PSFGSDMKKG TLVQWLVKEG DHIKRGDVVA VIETHKGAID LDLFEDALII 
SLLIKEGQQI AVGEPIARLS STKDSENAPL PQTDVADIEP NPISTTSPVN ISASPASTTT
ATDISSSPAS SAVEQDNSNF TTPKDFILAT PAARFLATQQ QLTLNSLFPE PSNKIVTLTM
VEQAIKQKQL SQQSPAMTEN VLKPADKKET AKVKATDRAA ARPKKGFDKE AMRQAISATV
TRSKQQIPHY YLRQRLDITA LEDYLLQVNA KLAIDQRLLL AAPLLCAVAR TLMDSQQLNG
EYTEGHFVAS EAIHLANAIN LRGGGLVMPV IRAAQTLSPS KMMERLKQQV THARNDSLVF
SELSGGSFTV TSIGERGAEQ MFAVIFPPQV AILALGSPHQ EVMAVDGSIK IRSVIEASLA
ADHRVSDGRI GARFLYQLNQ LLQNPEALWT V