| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3600 |
|---|
| Symbol | |
|---|
| ID | 4625150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4413794 |
|---|
| End bp | 4415548 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639798716 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | YP_944882 |
|---|
| Protein GI | 119947202 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT CTGAAATAAA AAAAGATCCT TTATCGGCAT CTGAGCATAA CTTAATTAAT
TACCAAGATA CTTATACTCA CTTTAACTGG CAACAGGCCC AGCAGCGTAT TGCCGGCAAT
AAAGATGGGT TAAATATCGC CTATGAAGCA CTGGATCGTC ATGTCGATGA GGGGTTTGGC
GAACAGATAG CCATTCGCTG GCTAAGCAAA CAGGGTTTGG CTGTAGACAT TAGTTATACG
GAATTAATGG AGCAAACCAG TCGTTTTGCC AATATTCTGC TCAAATTTGG TGTGAAGCCT
AATGATACTG TGTTCGGTTT ATGCAGCAGA GTACCGCAAC TCTATATCTC ATTATTGGGC
ACGCTTAAAT TTGGCGCGGT ATTTTCCCCC TTATTTTCAG CATTTGGTCC CGAGCCTATT
CGTTCACGCA TGGAGATAGG CCAAGCACGC GTTTTAATTA CCAGTGAAGC ACTTTATCTG
AAAAAAGTTA ACCCCTGGCG CGAACAGTTA AGCAGCCTAA AATGGGTGTT ATTGTATAAT
GTAACCGGCC CTCTCCCTGA TAATTGTTAT GATCTTGATG CTTTATTAGA AGAAAGTAGC
GCGGACTTCC CTGCCCGTCT CTGCGATCCG GAACAACTCG CTTTATTGCA CTTTACCTCG
GGCACAACGG GTAAACCTAA AGGCGCTATG CATGTTCATC AAGCCGTCGT TTACCATAGT
ATTTCCGCTT TTTACGCACT GGATCTTAAA CCCGGAGACC GTTATTGGTG TACCGCCGAT
CCGGGTTGGG TAACCGGCAC TTCCTACGGC ATTATTGCCC CGTTATGTAA TCGAGTCACT
ATGATCATTG ATGAAGCTGA ATTTGATGCT GAGCATTGGT ATCAGTTACT CAGCGAACAA
AAAATTAATG TCTGGTATAC CGCTCCGACC GCTATTCGTA TGTTAATGAA AGCTGGAGGT
GAGTTGGCCA CTCAATATGA TCTTAGTGCC TTACGTTTTA TTGCCAGTGT AGGTGAGCCC
CTTAATCCTG AAGCTGTCGT CTGGGGACAG AAAGTTTTTG CCATGCCGTT TCACGATAAC
TGGTGGCAGA CCGAAACTGG CGGCATCATG ATCGCCAACC TTGCAACGAA TGCCGTTCGC
CCAGGTTCAA TGGGCAGGCC CTTACCCGGT ATTGAGGTTG CCATTATGGA GCATACTGAA
GGGGGGGAAA TCAAAGCCAC TACAAAAGCA AATCAAGTCG GTGAGCTGGC ACTGAAAAAA
GGTTGGCCAT CTATGTTTCG TGGTTATCTG CATGAAGAGC AGCGTTATCA AAAATGTTTT
GTTGGTGATT GGTATTTAAC CGGCGACCTC GCGATGTGTG ATGCCGATGG TTATTACTGG
TTTGTGGGTC GGGCAGATGA TGTGATTAAA AGCTCGGGAC ATTTGATTGG TCCTTTTGAA
GTAGAAAGTG TGTTAATGGA GCACCCCGCT GTCGCCGAGG TTGGAGTGAT AGGTTTACCC
GATGAAGTCG CAGGTGAAAT CGTAAAAGCT TTTGTGGCCC TTAAACCCGG GTATGAAGGT
GATGAAATAT TACGTAAAAC GTTATTAGGT CATTCACGTA AACGTTTGGG CGCCGCCGTT
GCACCAAGAG AGATTGTTTT CCGTAAAAAT TTACCCAAGA CCCGCAGTGG CAAAATTATG
CGCCGTTTAT TAAAAGCGCG CGAACTCGGA TTGCCGGAAG GTGATATTTC CACTCTTGAA
AGTGATGAAG CCTAA
|
|---|
| Protein sequence | MSFSEIKKDP LSASEHNLIN YQDTYTHFNW QQAQQRIAGN KDGLNIAYEA LDRHVDEGFG
EQIAIRWLSK QGLAVDISYT ELMEQTSRFA NILLKFGVKP NDTVFGLCSR VPQLYISLLG
TLKFGAVFSP LFSAFGPEPI RSRMEIGQAR VLITSEALYL KKVNPWREQL SSLKWVLLYN
VTGPLPDNCY DLDALLEESS ADFPARLCDP EQLALLHFTS GTTGKPKGAM HVHQAVVYHS
ISAFYALDLK PGDRYWCTAD PGWVTGTSYG IIAPLCNRVT MIIDEAEFDA EHWYQLLSEQ
KINVWYTAPT AIRMLMKAGG ELATQYDLSA LRFIASVGEP LNPEAVVWGQ KVFAMPFHDN
WWQTETGGIM IANLATNAVR PGSMGRPLPG IEVAIMEHTE GGEIKATTKA NQVGELALKK
GWPSMFRGYL HEEQRYQKCF VGDWYLTGDL AMCDADGYYW FVGRADDVIK SSGHLIGPFE
VESVLMEHPA VAEVGVIGLP DEVAGEIVKA FVALKPGYEG DEILRKTLLG HSRKRLGAAV
APREIVFRKN LPKTRSGKIM RRLLKARELG LPEGDISTLE SDEA
|
|---|
| |