Gene Ping_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3575 
SymbolflgE 
ID4625161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4392480 
End bp4393676 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content44% 
IMG OID639798691 
Productflagellar hook protein FlgE 
Protein accessionYP_944857 
Protein GI119947177 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTA ATATTGCAAT CAGTGGGTTA AATGCCACCA ATAAACAATT AAATACAATT 
TCAAATAATA TCGCAAATGT TTCAACCTAT GGTTTTAAGG AATCTCGAGC CGAGTTTGCC
TCTATCTATA ATGGTGGTCA GGCAGGTGGT GTTGAAGTCT CGGGTATTAC CCAGAACTTT
GACCGTAATG GTTCGCTTGA AGCAACCGGT CGCGCACTGG ATTTGGCGAT TAGTGGTAAT
GGTTTTTTTG CAACGGTAGA CAACAAAGGT CAGCAGATTT ACACACGTTC AGGGGCATTT
TCCACCGATA AAGACAACTT TATTGTTTCC AGTGCAGGTA ATAAGCTGCA GGGTTATACC
GTCGATGCAA AGGCTAATCT GCAGAAGGGT AATATCGATG ATCTCGCTAT TTCGACAGCT
TCATTATCAG CAAAAGCAAC AGACAGTATT GAATTTACTG CTAATTTTGA TGCTAGAGCA
ACGCCGGTGG CAAGTGCTGC TTTTGATCCT GCCGATCCAA CTTCGTTTAC ATCTTCTTAC
ACAGCGCAGG CATTTGATTC TTTGGGTAAC GCCCACACAG TGTCACAATA TTTTATTAAT
ACCGGCTCAA ATCAGTGGAA TATTAAAGTT ATTGCTGATG ACAACGATGT CACTCCCGAC
CCGGCACCGG TGATTGAATT TACGACTGAA GGCTTGTTGG CTGATACTTC GACTATACCA
ATCTTGGTTT CGATTCCTGC TCTGGGTGCA AACTTGATAG CCGTTGAAAT TGACTTAACC
GGATCGACGC AATATGGAGC AGACTTTGGT GTCAGTACCA ATAATCCCAA TGGTTACACT
GCGGGCGAAC TAACCGGTAT ACGTGTTGAG GATAATGGTA TGATTTTTGC GCAGTTTACC
AACGGGCAAA GTCAGTTGCA GGGGCAGTTA GTATTAGCCG ATTTCCCCAA TCCAACCGCA
CTGGAACAGA GTAATAATAC TTCCTGGATG CAGACTTTTG GGTCGGGCAC ACCCGTCAAA
GGCGCGCCGG GCAGTGGTGT GTTAGGCAAA TTAACATCCA ATATGCTTGA GACTTCCAAT
GTTGATTTAA CCAGCGAGTT GGTCAGCCTG ATGACAGCAC AACGTAATTA TCAGGCGAAT
ACAAAAACTA TTTCAACTGC AGATCAGCTG ACCAAAGCCT TATTTAATGC GGTTTAA
 
Protein sequence
MSFNIAISGL NATNKQLNTI SNNIANVSTY GFKESRAEFA SIYNGGQAGG VEVSGITQNF 
DRNGSLEATG RALDLAISGN GFFATVDNKG QQIYTRSGAF STDKDNFIVS SAGNKLQGYT
VDAKANLQKG NIDDLAISTA SLSAKATDSI EFTANFDARA TPVASAAFDP ADPTSFTSSY
TAQAFDSLGN AHTVSQYFIN TGSNQWNIKV IADDNDVTPD PAPVIEFTTE GLLADTSTIP
ILVSIPALGA NLIAVEIDLT GSTQYGADFG VSTNNPNGYT AGELTGIRVE DNGMIFAQFT
NGQSQLQGQL VLADFPNPTA LEQSNNTSWM QTFGSGTPVK GAPGSGVLGK LTSNMLETSN
VDLTSELVSL MTAQRNYQAN TKTISTADQL TKALFNAV